| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001327553.1 | Gene: | AT3G53830 / 824550 | AraportID: | AT3G53830 | Length: | 500 | Species: | Arabidopsis thaliana |
| Alignment Length: | 440 | Identity: | 110/440 - (25%) |
|---|---|---|---|
| Similarity: | 160/440 - (36%) | Gaps: | 139/440 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 ELYCWGST-----------SHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATG 59
Fly 60 KVYA-----C------------GSNDYSQLGHDL------------------------------- 76
Fly 77 ----------------PTKRPRMSP--------------FLLIPELQD----YVIIQICCGSRHS 107
Fly 108 LALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQL-----------------VTKTVVQ--- 152
Fly 153 --------IACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 209
Fly 210 CGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQL--KTLRTLGVRFVACGDEFSVFLTN 272
Fly 273 EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 322 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 14/59 (24%) |
| RCC1 | 59..110 | CDD:278826 | 18/132 (14%) | ||
| RCC1 | 114..163 | CDD:278826 | 19/76 (25%) | ||
| RCC1 | 167..218 | CDD:278826 | 13/50 (26%) | ||
| RCC1 | 221..270 | CDD:278826 | 15/50 (30%) | ||
| RCC1 | 273..322 | CDD:278826 | 19/48 (40%) | ||
| RCC1_2 | 309..339 | CDD:290274 | 8/14 (57%) | ||
| RCC1 | 327..390 | CDD:278826 | |||
| HECTc | 715..1060 | CDD:238033 | |||
| HECTc | 739..1059 | CDD:214523 | |||
| AT3G53830 | NP_001327553.1 | None | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.920 | |||||