Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001325559.1 | Gene: | AT3G47660 / 823920 | AraportID: | AT3G47660 | Length: | 990 | Species: | Arabidopsis thaliana |
Alignment Length: | 586 | Identity: | 139/586 - (23%) |
---|---|---|---|
Similarity: | 229/586 - (39%) | Gaps: | 137/586 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ELYCWG-STSHGQLGLGGI----EDEQILTPSQIPWTPDTAV----QQVACGHRHTLFLTATGKV 61
Fly 62 YACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND--C 124
Fly 125 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT 189
Fly 190 HCNYPLRLTTLLGIPLAAIACGGNHSFLI-------SKSGAVFGWGRNNCGQLGLNDETNRSYPT 247
Fly 248 QLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG------------AYGQLGHGFSSNEMLPRM 300
Fly 301 VMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSA 365
Fly 366 LLQSNDSQVSLVIRQIFSGGDQSIVTTTLFVDKVPPEDFRNYNPKSQILTLTAEVTKQCAQCKQG 430
Fly 431 LQSDMDLLSSIELIFRSQACWN-GSFLLDHDRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIRQ 494
Fly 495 VIWDNITKELVGSLVCSPA--DVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAIFKLAENPRKV 557
Fly 558 L 558 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 15/57 (26%) |
RCC1 | 59..110 | CDD:278826 | 13/50 (26%) | ||
RCC1 | 114..163 | CDD:278826 | 14/50 (28%) | ||
RCC1 | 167..218 | CDD:278826 | 16/50 (32%) | ||
RCC1 | 221..270 | CDD:278826 | 18/48 (38%) | ||
RCC1 | 273..322 | CDD:278826 | 12/60 (20%) | ||
RCC1_2 | 309..339 | CDD:290274 | 12/29 (41%) | ||
RCC1 | 327..390 | CDD:278826 | 17/62 (27%) | ||
HECTc | 715..1060 | CDD:238033 | |||
HECTc | 739..1059 | CDD:214523 | |||
AT3G47660 | NP_001325559.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |