Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001007319.1 | Gene: | ube3a / 792398 | ZFINID: | ZDB-GENE-041114-190 | Length: | 857 | Species: | Danio rerio |
Alignment Length: | 782 | Identity: | 220/782 - (28%) |
---|---|---|---|
Similarity: | 374/782 - (47%) | Gaps: | 139/782 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 399 VPP--EDFRNYN-----PKSQILTLTAEV------------------------------TKQCAQ 426
Fly 427 CKQGLQSDMD-------LLSSIELIFRSQACWNGSFLLDHDRHFGCSVRNHG-----LDLKAAQL 479
Fly 480 AFDNLRAVENESIRQVIWDNITKELVGSLVCS-------PADVESMRLYLLLPLYHEFVNSKHYK 537
Fly 538 SLQVP-FANAIFKLAENPRKVLNK----WLAQTPAEYFEHLVQNFLHVVIH-IISFKM------- 589
Fly 590 ---GLAAAS-----------------------------PSA-----------ERRQQLLPYNTEL 611
Fly 612 EIILKLMKTLCQINNERHDRLNYQIFYWPDLSDYADVQQEYVKWIMADTARDFNICNYSFIFDQS 676
Fly 677 AKTALLQADQALQMHSAMANAATMAFSFFNYGMPISQFIVLNVTRENLVQDSLRELQHYSQ---S 738
Fly 739 DLKKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQSRLLWFADLTFETENMYFL 803
Fly 804 IGVLCGLAIYNFTIINLPFPLALFKKLLGKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDL 868
Fly 869 TFEISR-DVFGEAETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSG 932
Fly 933 RVI-HIFQPEELMAVVVGNEDYDWQALQDNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLLF 996
Fly 997 LTGSDRIPIQGMKALKLTIQPT-PDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGFS 1060
Fly 1061 LV 1062 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | |||
RCC1 | 167..218 | CDD:278826 | |||
RCC1 | 221..270 | CDD:278826 | |||
RCC1 | 273..322 | CDD:278826 | |||
RCC1_2 | 309..339 | CDD:290274 | |||
RCC1 | 327..390 | CDD:278826 | |||
HECTc | 715..1060 | CDD:238033 | 141/350 (40%) | ||
HECTc | 739..1059 | CDD:214523 | 134/322 (42%) | ||
ube3a | NP_001007319.1 | AZUL | 6..60 | CDD:293166 | |
HECTc | 505..855 | CDD:238033 | 141/350 (40%) | ||
HECTc | 532..854 | CDD:214523 | 134/322 (42%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D276447at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |