| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001347539.1 | Gene: | Rcbtb1 / 71330 | MGIID: | 1918580 | Length: | 531 | Species: | Mus musculus |
| Alignment Length: | 582 | Identity: | 145/582 - (24%) |
|---|---|---|---|
| Similarity: | 230/582 - (39%) | Gaps: | 166/582 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 53 LFLTATGKVYACGSNDYSQ---LGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSR--------- 105
Fly 106 -HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGEL 169
Fly 170 YSWGSNIYGQLGVNS------PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 228
Fly 229 RNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSS 293
Fly 294 NEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQV----- 353
Fly 354 ---VIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQSIVTTTLFVDKVPPEDFRNYNPKSQILT 415
Fly 416 LTAEVTKQCAQCKQGLQSDMDLLSSIELIFRSQACWNGSFLLDHDRHFGCSVRNHGLDLKAAQLA 480
Fly 481 FDNLRAVENESIRQVIWDNITKELVGSLVCSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFAN 545
Fly 546 AIFKLAENPRKVLNKWLAQTPAEYFEHLVQNFLHVVIHII--------SFKMGLAAASPSAE 599 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 0/1 (0%) |
| RCC1 | 59..110 | CDD:278826 | 13/63 (21%) | ||
| RCC1 | 114..163 | CDD:278826 | 18/48 (38%) | ||
| RCC1 | 167..218 | CDD:278826 | 19/56 (34%) | ||
| RCC1 | 221..270 | CDD:278826 | 18/48 (38%) | ||
| RCC1 | 273..322 | CDD:278826 | 18/48 (38%) | ||
| RCC1_2 | 309..339 | CDD:290274 | 10/29 (34%) | ||
| RCC1 | 327..390 | CDD:278826 | 14/70 (20%) | ||
| HECTc | 715..1060 | CDD:238033 | |||
| HECTc | 739..1059 | CDD:214523 | |||
| Rcbtb1 | NP_001347539.1 | RCC1 1 | 40..91 | 13/65 (20%) | |
| ATS1 | 43..>316 | CDD:227511 | 95/296 (32%) | ||
| RCC1 2 | 93..145 | 20/51 (39%) | |||
| RCC1 3 | 147..198 | 19/58 (33%) | |||
| RCC1 4 | 199..250 | 19/50 (38%) | |||
| RCC1 5 | 252..302 | 18/49 (37%) | |||
| RCC1 6 | 304..356 | 19/97 (20%) | |||
| BTB_POZ_RCBTB1_CLLD7 | 350..466 | CDD:349662 | 33/186 (18%) | ||
| BACK_RCBTB1 | 466..531 | CDD:350603 | 5/20 (25%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.920 | |||||