Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_080268.1 | Gene: | Herc6 / 67138 | MGIID: | 1914388 | Length: | 1003 | Species: | Mus musculus |
Alignment Length: | 1090 | Identity: | 352/1090 - (32%) |
---|---|---|---|
Similarity: | 544/1090 - (49%) | Gaps: | 131/1090 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 YCWGSTSHG----QLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSND 68
Fly 69 YSQLG--HDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 131
Fly 132 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--NSPNDLTHCNYP 194
Fly 195 LRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL--NDETNRSY-PTQLKTLRTLG 256
Fly 257 VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLA 321
Fly 322 LVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGD 386
Fly 387 QSIVTT--------TLFVDKVPPEDFRNYNPKSQILTLTAEVTKQCAQC-----KQGLQSDMDLL 438
Fly 439 SSIELIFRSQACWNGSFLLDHDRHFGCSVRNH--GLDLKAAQLAFDNLRAVENESIRQVIWDNIT 501
Fly 502 KELVGSLVCSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAIFKLAENPRKVLNKWLAQTP 566
Fly 567 AEYFEHLVQNFLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKLMKTLCQ------IN 625
Fly 626 NERHDRLNYQIFYWPDLSDYADVQQEYVKWIMADTARDFNICNYS---FIFDQSAKTALLQADQA 687
Fly 688 LQMHSAMANAATMAFSFFNYGMPISQFIVLNVTRENLVQDSLRELQHYSQSDLKKPLKIKFHGEE 752
Fly 753 AEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQSRLLWF-ADLTFETENMYFLIGVLCGLAIYNFT 816
Fly 817 IINLPFPLALFKKLLGKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLTFEISRDVFGEAE 881
Fly 882 TKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAV 946
Fly 947 VVGNEDYDWQALQDNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGM--K 1009
Fly 1010 ALKLTIQPTPDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGF 1059 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 11/50 (22%) |
RCC1 | 59..110 | CDD:278826 | 19/52 (37%) | ||
RCC1 | 114..163 | CDD:278826 | 19/48 (40%) | ||
RCC1 | 167..218 | CDD:278826 | 24/52 (46%) | ||
RCC1 | 221..270 | CDD:278826 | 19/51 (37%) | ||
RCC1 | 273..322 | CDD:278826 | 17/48 (35%) | ||
RCC1_2 | 309..339 | CDD:290274 | 11/29 (38%) | ||
RCC1 | 327..390 | CDD:278826 | 15/62 (24%) | ||
HECTc | 715..1060 | CDD:238033 | 139/348 (40%) | ||
HECTc | 739..1059 | CDD:214523 | 128/322 (40%) | ||
Herc6 | NP_080268.1 | RCC1 1 | 40..91 | 20/55 (36%) | |
RCC1 | 40..89 | CDD:278826 | 19/53 (36%) | ||
RCC1 2 | 92..144 | 21/51 (41%) | |||
RCC1 | 92..142 | CDD:278826 | 19/49 (39%) | ||
RCC1 | 145..195 | CDD:278826 | 24/53 (45%) | ||
RCC1 3 | 146..197 | 24/54 (44%) | |||
RCC1_2 | 183..211 | CDD:290274 | 14/27 (52%) | ||
RCC1 4 | 199..252 | 20/52 (38%) | |||
RCC1_2 | 237..266 | CDD:290274 | 12/28 (43%) | ||
RCC1 5 | 253..303 | 18/50 (36%) | |||
RCC1 | 253..300 | CDD:278826 | 17/47 (36%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 261..281 | 5/19 (26%) | |||
chaperonin_like | <570..>652 | CDD:295468 | 20/99 (20%) | ||
HECTc | 658..999 | CDD:238033 | 137/346 (40%) | ||
HECTc | 682..999 | CDD:214523 | 128/322 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG57432 | |
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001110 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45622 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X678 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
8 | 7.890 |