Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021329502.1 | Gene: | sergef / 565673 | ZFINID: | ZDB-GENE-061220-11 | Length: | 397 | Species: | Danio rerio |
Alignment Length: | 367 | Identity: | 111/367 - (30%) |
---|---|---|---|
Similarity: | 171/367 - (46%) | Gaps: | 33/367 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 LYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYS 70
Fly 71 QLG--HDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDK 133
Fly 134 EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI--YGQLGVNS---PNDLTHCNY 193
Fly 194 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQL--KTLRTLG 256
Fly 257 VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF---SSNEMLPRMVME---LMGSTITQV 312
Fly 313 ACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 354 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 16/48 (33%) |
RCC1 | 59..110 | CDD:278826 | 14/52 (27%) | ||
RCC1 | 114..163 | CDD:278826 | 16/48 (33%) | ||
RCC1 | 167..218 | CDD:278826 | 10/55 (18%) | ||
RCC1 | 221..270 | CDD:278826 | 16/50 (32%) | ||
RCC1 | 273..322 | CDD:278826 | 24/57 (42%) | ||
RCC1_2 | 309..339 | CDD:290274 | 12/29 (41%) | ||
RCC1 | 327..390 | CDD:278826 | 9/28 (32%) | ||
HECTc | 715..1060 | CDD:238033 | |||
HECTc | 739..1059 | CDD:214523 | |||
sergef | XP_021329502.1 | RCC1 | 13..387 | CDD:332518 | 111/367 (30%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |