Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009304826.1 | Gene: | hectd2 / 562999 | ZFINID: | ZDB-GENE-100405-3 | Length: | 756 | Species: | Danio rerio |
Alignment Length: | 703 | Identity: | 210/703 - (29%) |
---|---|---|---|
Similarity: | 337/703 - (47%) | Gaps: | 72/703 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 396 VDKVPPEDFRNY--NPKSQILTLTAEVTKQCAQCKQGLQSDMDLLSSIEL-IFRSQACWNGSFLL 457
Fly 458 DHDRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIRQVIWDNITKELVGSLV---CSPADVESMR 519
Fly 520 LYLLLPLYHEFVNSKHYKS-----LQVPFANAIFKLAENPRKVLNKWLAQTPAEYFEHLVQNF-L 578
Fly 579 HVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKLMKTLCQINNERHDRLNYQIFYWPDLS 643
Fly 644 DYADVQQEYVKWIMADTARDFNICNYSFIFDQSAKTALLQADQALQMHS----------AMANAA 698
Fly 699 TMAFSFFNYGMPISQFIVLNVTRENLVQDSLRELQHYSQSDLKKPLKIKFHGEEAEDAGGVRKEF 763
Fly 764 FMLLLKDLLDPKYGMFKEYEQSRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFK 828
Fly 829 KLLGKPV--------------DLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLTFEISRDVFGE 879
Fly 880 AETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELM 944
Fly 945 AVVVGNEDYDWQALQDNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGMK 1009
Fly 1010 ALKLTIQPTP-DERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGFSL 1061 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | |||
RCC1 | 167..218 | CDD:278826 | |||
RCC1 | 221..270 | CDD:278826 | |||
RCC1 | 273..322 | CDD:278826 | |||
RCC1_2 | 309..339 | CDD:290274 | |||
RCC1 | 327..390 | CDD:278826 | |||
HECTc | 715..1060 | CDD:238033 | 137/359 (38%) | ||
HECTc | 739..1059 | CDD:214523 | 127/334 (38%) | ||
hectd2 | XP_009304826.1 | HECTc | 397..754 | CDD:238033 | 138/369 (37%) |
HECTc | 420..753 | CDD:214523 | 127/334 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D276447at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R774 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.850 |