Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017211386.1 | Gene: | herc5.1 / 559981 | ZFINID: | ZDB-GENE-090311-56 | Length: | 884 | Species: | Danio rerio |
Alignment Length: | 961 | Identity: | 320/961 - (33%) |
---|---|---|---|
Similarity: | 480/961 - (49%) | Gaps: | 126/961 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 142 VRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 206
Fly 207 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT 271
Fly 272 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 336
Fly 337 SGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQSIVTTTLFVDKVPP 401
Fly 402 EDFRNYNPKSQILTLTAEVTKQCAQCKQGLQSDMDLLSSIELIFRSQACWNGSFL-LDHDRHFGC 465
Fly 466 SVRNHGLDLKAAQLAFDNLRAVENESIRQVIWDNITKELVGSLVCSPADVESMRLYLLLPLYHEF 530
Fly 531 VNSKHYKSLQVPFANAIFKLAENPRKVLNKWLAQTPAEYFEHLVQNFL--------HVVI----- 582
Fly 583 ----HIISFKMGLAAASPSAERRQQLLPYNTELEIILKLMKTLCQINNERHDRLNYQIFYWPDLS 643
Fly 644 DYADVQQEYVKWIMADTARD---FNICNYSFIFDQSAKTALLQADQALQMHS--AMANAATMAF- 702
Fly 703 ---SF---FNYGMPISQF--------IVLNVTRENLVQDSLRELQHYSQSDLK-KPLKIKFHGEE 752
Fly 753 AEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQSRLLWF-ADLTFETENMYFLIGVLCGLAIYNFT 816
Fly 817 IINLPFPLALFKKLLGKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKE-VFDLTFEISRDVFGEA 880
Fly 881 ETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMA 945
Fly 946 VVVGNEDYDWQALQDNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGMKA 1010
Fly 1011 LKLTIQ--PTPDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGF 1059 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | 9/20 (45%) | ||
RCC1 | 167..218 | CDD:278826 | 24/50 (48%) | ||
RCC1 | 221..270 | CDD:278826 | 22/48 (46%) | ||
RCC1 | 273..322 | CDD:278826 | 26/48 (54%) | ||
RCC1_2 | 309..339 | CDD:290274 | 12/29 (41%) | ||
RCC1 | 327..390 | CDD:278826 | 16/62 (26%) | ||
HECTc | 715..1060 | CDD:238033 | 139/350 (40%) | ||
HECTc | 739..1059 | CDD:214523 | 129/324 (40%) | ||
herc5.1 | XP_017211386.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG57432 | |
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001110 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45622 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X678 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.890 |