| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_021324687.1 | Gene: | nedd4l / 559634 | ZFINID: | ZDB-GENE-051118-2 | Length: | 1279 | Species: | Danio rerio |
| Alignment Length: | 590 | Identity: | 166/590 - (28%) |
|---|---|---|---|
| Similarity: | 268/590 - (45%) | Gaps: | 99/590 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 512 PADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAIFKLAENPRKVLNKWLAQTPAEYFEHLVQN 576
Fly 577 FLHVVIHIISFKMGLAAASPSAERR--QQLLPYNTELEIILKLMKTLCQINNE----RHDRLNYQ 635
Fly 636 IFYWP-------DLSDYADVQQE--YVKWIMADTARDFNICNYSFIFDQSAKTALLQADQALQMH 691
Fly 692 SAMANAATMAFSF---FNY-------GMPISQFIVLNVTRENLVQDSLRELQHYSQSD-LKKPLK 745
Fly 746 IKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQS-----RLLWFADLTFETENMYF-LI 804
Fly 805 GVLCGLAIYNFTIINLPFPLALFKKLLGKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLT 869
Fly 870 FEISRDVFGEAETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRV 934
Fly 935 IHIFQPEELMAVVVGNEDYDWQALQDNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLL-FLT 998
Fly 999 GSDRIPIQGMKAL-------KLTIQP--TPDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQ 1054
Fly 1055 QTQGF 1059 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | |||
| RCC1 | 221..270 | CDD:278826 | |||
| RCC1 | 273..322 | CDD:278826 | |||
| RCC1_2 | 309..339 | CDD:290274 | |||
| RCC1 | 327..390 | CDD:278826 | |||
| HECTc | 715..1060 | CDD:238033 | 126/362 (35%) | ||
| HECTc | 739..1059 | CDD:214523 | 120/336 (36%) | ||
| nedd4l | XP_021324687.1 | C2 | <374..430 | CDD:326325 | |
| WW | 473..499 | CDD:306827 | |||
| WW | 669..698 | CDD:306827 | |||
| WW | 798..829 | CDD:197736 | 5/30 (17%) | ||
| WW | 856..885 | CDD:238122 | 6/37 (16%) | ||
| HECTc | 946..1275 | CDD:214523 | 120/336 (36%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||