| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038964101.1 | Gene: | Magi1 / 500261 | RGDID: | 1586025 | Length: | 1491 | Species: | Rattus norvegicus |
| Alignment Length: | 317 | Identity: | 63/317 - (19%) |
|---|---|---|---|
| Similarity: | 101/317 - (31%) | Gaps: | 87/317 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 182 VNSPNDLTH-CNYPLRLTTLLGIPLAAIACGGNHSF--LISKSGAVFGWGRNNCGQLGLNDETNR 243
Fly 244 SYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVF---TCGAGAY--GQLGHGFSSNE----MLPR 299
Fly 300 MVMELMGSTITQVA----------CGNRHTLALVPSRGRVYAFGLGSS------------GQLGT 342
Fly 343 RSTKSLMLPQ-----VVIGPWVSPS---------------GSALLQSNDSQVSLVIRQIFSGGDQ 387
Fly 388 SIVTTTLFVDKVPPEDFRNYNPKSQILTLTAEVTKQCAQCKQGLQSDMDLLSSIELI 444 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | 11/38 (29%) | ||
| RCC1 | 221..270 | CDD:278826 | 12/48 (25%) | ||
| RCC1 | 273..322 | CDD:278826 | 13/67 (19%) | ||
| RCC1_2 | 309..339 | CDD:290274 | 9/51 (18%) | ||
| RCC1 | 327..390 | CDD:278826 | 13/94 (14%) | ||
| HECTc | 715..1060 | CDD:238033 | |||
| HECTc | 739..1059 | CDD:214523 | |||
| Magi1 | XP_038964101.1 | NK | 122..293 | CDD:418433 | |
| WW | 302..331 | CDD:395320 | |||
| WW | 362..393 | CDD:197736 | |||
| PDZ | 469..555 | CDD:214570 | |||
| PDZ | 640..723 | CDD:214570 | |||
| MAGI_u5 | 724..806 | CDD:406953 | |||
| PDZ_signaling | 847..922 | CDD:238492 | |||
| PDZ_signaling | 996..1091 | CDD:238492 | 19/97 (20%) | ||
| PDZ | 1152..1234 | CDD:214570 | 16/93 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||