| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001102581.1 | Gene: | Wwc2 / 498630 | RGDID: | 1559427 | Length: | 1194 | Species: | Rattus norvegicus |
| Alignment Length: | 547 | Identity: | 109/547 - (19%) |
|---|---|---|---|
| Similarity: | 173/547 - (31%) | Gaps: | 191/547 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 365 ALLQSNDSQVSLVIRQIFSGGDQSIVTTTLFVDKVPPEDFRNYNP---KSQILTLTAEVTK---Q 423
Fly 424 CAQCKQGLQSDMDLLSSIELIFRSQACWNGSFLLDHDRHFGCSVRNHGLDLKAAQLAFDNLRAV- 487
Fly 488 ----ENESIRQVIWDNITK--------ELVGS----LVCSPADVESMRLYLLLPLYHEFVNSKHY 536
Fly 537 KSLQVPFANAIFKLAENPRKVLNKWLAQTPAEYFEHLVQNFLHVVIHIISFKMGLAAASPSAERR 601
Fly 602 QQLLPYNTELEIILKLMKTLCQINNERHDRLNYQIFYWPDLSDYADVQQEYVKWIMADTARDFNI 666
Fly 667 CNYSFIFDQSA---KTALLQAD-QALQMHSAMANAATMAFSFFNYGMP---ISQFIVLNVTRENL 724
Fly 725 VQ--DSLRELQHYSQSDLKKPLKIKFH-------GEEAEDAGGV----RKEFFMLLLKDLLDPKY 776
Fly 777 G--MFKEYEQSRLLWFADLTFETENMYFLIGV--------------------LCGLAIYNFTIIN 819
Fly 820 LPFPLALFKKLLGKPVDLSDLRQLSPP 846 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | |||
| RCC1 | 221..270 | CDD:278826 | |||
| RCC1 | 273..322 | CDD:278826 | |||
| RCC1_2 | 309..339 | CDD:290274 | |||
| RCC1 | 327..390 | CDD:278826 | 8/24 (33%) | ||
| HECTc | 715..1060 | CDD:238033 | 36/167 (22%) | ||
| HECTc | 739..1059 | CDD:214523 | 29/141 (21%) | ||
| Wwc2 | NP_001102581.1 | WW | 12..41 | CDD:278809 | |
| WW | 59..88 | CDD:278809 | |||
| DUF342 | <283..385 | CDD:302792 | 26/136 (19%) | ||
| YlqD | 351..>420 | CDD:287979 | 14/79 (18%) | ||
| C2_Kibra | 699..822 | CDD:176062 | |||
| Phage_Nu1 | <1095..>1153 | CDD:294991 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||