| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_012815048.1 | Gene: | nedd4l / 448382 | XenbaseID: | XB-GENE-489248 | Length: | 1290 | Species: | Xenopus tropicalis |
| Alignment Length: | 360 | Identity: | 125/360 - (34%) |
|---|---|---|---|
| Similarity: | 200/360 - (55%) | Gaps: | 25/360 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 717 LNVTRENLVQDSLRELQHYSQSD-LKKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFK 780
Fly 781 EYEQS-----RLLWFADLTFETENMYF-LIGVLCGLAIYNFTIINLPFPLALFKKLLGKPVDLSD 839
Fly 840 LRQLSPPEANSMQSLLDYQGDDFKEVFDLTFEISRDVFGEAETKCLKPNGNEIAVTLENRQEFVD 904
Fly 905 LYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNEDYDWQALQDNCEYREGYT 969
Fly 970 SVDDTIKWFWEVIHDMSEAEKKSFLL-FLTGSDRIPIQGMKAL-------KLTIQP--TPDERFL 1024
Fly 1025 PVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGF 1059 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | |||
| RCC1 | 221..270 | CDD:278826 | |||
| RCC1 | 273..322 | CDD:278826 | |||
| RCC1_2 | 309..339 | CDD:290274 | |||
| RCC1 | 327..390 | CDD:278826 | |||
| HECTc | 715..1060 | CDD:238033 | 125/360 (35%) | ||
| HECTc | 739..1059 | CDD:214523 | 119/336 (35%) | ||
| nedd4l | XP_012815048.1 | C2 | <389..442 | CDD:301316 | |
| WW | 485..513 | CDD:238122 | |||
| WW | 683..712 | CDD:278809 | |||
| WW | 796..826 | CDD:238122 | |||
| WW | 845..896 | CDD:197736 | |||
| HECTc | 933..1287 | CDD:238033 | 125/360 (35%) | ||
| HECTc | 957..1286 | CDD:214523 | 119/336 (35%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||