Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001286661.1 | Gene: | Magi / 37403 | FlyBaseID: | FBgn0034590 | Length: | 1202 | Species: | Drosophila melanogaster |
Alignment Length: | 378 | Identity: | 80/378 - (21%) |
---|---|---|---|
Similarity: | 142/378 - (37%) | Gaps: | 86/378 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 286 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLML 350
Fly 351 PQVV-IGP-WVS---PSGSALLQSNDSQV------SLVIRQIFSGGDQSIV---TTTLFVDKVPP 401
Fly 402 EDFRNYNPKSQILTLTA----EVTKQCAQCKQGLQSDMDLLSSIELIFRSQACWNGSFLLDHDRH 462
Fly 463 FGCSVR--NHGLDLKAAQLAFDNL--RAVENESIRQVIWDNITKELVGSLVCSPADVESMRLYLL 523
Fly 524 LPLYHEFVNSKHYKSLQVPFANAIFKLAENPRKVLNKWLAQTPAEYFEHLVQNFLHVVIHIISFK 588
Fly 589 MGLAAA------SPSAERRQQLLPYNTELEIILKLMKTLCQINNERHDRLNYQ 635 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | |||
RCC1 | 167..218 | CDD:278826 | |||
RCC1 | 221..270 | CDD:278826 | |||
RCC1 | 273..322 | CDD:278826 | 8/35 (23%) | ||
RCC1_2 | 309..339 | CDD:290274 | 8/29 (28%) | ||
RCC1 | 327..390 | CDD:278826 | 21/73 (29%) | ||
HECTc | 715..1060 | CDD:238033 | |||
HECTc | 739..1059 | CDD:214523 | |||
Magi | NP_001286661.1 | WW | 294..323 | CDD:278809 | |
WW | 342..372 | CDD:238122 | |||
PDZ | 443..534 | CDD:214570 | 29/105 (28%) | ||
DegQ | <455..534 | CDD:223343 | 24/85 (28%) | ||
PDZ_signaling | 606..668 | CDD:238492 | 10/74 (14%) | ||
PDZ | 925..1011 | CDD:214570 | |||
PDZ_signaling | 1029..1110 | CDD:238492 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |