| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006240148.1 | Gene: | Hectd1 / 362736 | RGDID: | 1561653 | Length: | 2610 | Species: | Rattus norvegicus |
| Alignment Length: | 488 | Identity: | 109/488 - (22%) |
|---|---|---|---|
| Similarity: | 174/488 - (35%) | Gaps: | 172/488 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 722 ENLVQDSLRELQHYSQSDLKKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQSR 786
Fly 787 L-LWFADLTFETE----------------------------------------NMYFLIGVLCGL 810
Fly 811 AIYNFTIINLPFPLALFKKLLGKPV--DLSDL-------RQLSPPEANSMQS------------- 853
Fly 854 --------LLD---------YQG----DDF-----------KEVFDLTFEISRDVFG-------E 879
Fly 880 AETK---------------------------C------------LKPNGNEIAVTLENRQEFVDL 905
Fly 906 YVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNEDYDWQALQDNCEYRE---G 967
Fly 968 YTSVDDTIKWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGMKAL--KLTIQPTPD--ERFLPVAH 1028
Fly 1029 TCFNLLDLPRYKTKERLKYKLLQAIQQTQGFSL 1061 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | |||
| RCC1 | 221..270 | CDD:278826 | |||
| RCC1 | 273..322 | CDD:278826 | |||
| RCC1_2 | 309..339 | CDD:290274 | |||
| RCC1 | 327..390 | CDD:278826 | |||
| HECTc | 715..1060 | CDD:238033 | 107/485 (22%) | ||
| HECTc | 739..1059 | CDD:214523 | 103/467 (22%) | ||
| Hectd1 | XP_006240148.1 | Ank_2 | 366..457 | CDD:289560 | |
| ANK repeat | 366..393 | CDD:293786 | |||
| ANK | 369..479 | CDD:238125 | |||
| ANK repeat | 396..426 | CDD:293786 | |||
| ANK repeat | 428..457 | CDD:293786 | |||
| F5_F8_type_C | 1107..1240 | CDD:304887 | |||
| MIB_HERC2 | 1277..1335 | CDD:284184 | |||
| HECTc | 2131..2608 | CDD:238033 | 107/485 (22%) | ||
| HECTc | 2155..2607 | CDD:214523 | 102/466 (22%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.900 | |||||