Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102101.1 | Gene: | Herc3 / 362377 | RGDID: | 1307803 | Length: | 1050 | Species: | Rattus norvegicus |
Alignment Length: | 1078 | Identity: | 478/1078 - (44%) |
---|---|---|---|
Similarity: | 665/1078 - (61%) | Gaps: | 52/1078 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQ 71
Fly 72 LGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIV 136
Fly 137 QLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS--PNDLTHCNYPLRLTT 199
Fly 200 LLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGD 264
Fly 265 EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRV 329
Fly 330 YAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQSIVTTTL 394
Fly 395 FVDKVPPEDFRNYNPKSQILTLTAEVTKQCAQCKQGLQSDMDLLSSIELIFRSQACWNGSFLLDH 459
Fly 460 -DRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIRQVIWDNITKELVGSLVCSPADVESMRLYLL 523
Fly 524 LPLYHEFVNSKHYKSLQVPFANAIFKLAENPRKVLNKWLAQTPAEYFEHLVQNFLHVVIHIISFK 588
Fly 589 MGLAAASPSAERRQQLLP--YNTELEIILKLMKTLCQIN-NERHDRLNYQIFYWPDLSDYADVQQ 650
Fly 651 EYVKW------------IMADTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMAFS 703
Fly 704 FFNYGM-PI---SQFIVLNVTRENLVQDSLRELQHYSQSDLKKPLKIKFHGEEAEDAGGVRKEFF 764
Fly 765 MLLLKDLLDPKYGMFKEYEQSRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKK 829
Fly 830 LLGKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLTFEISRDVFGEAETKCLKPNGNEIAV 894
Fly 895 TLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNEDYDWQALQ 959
Fly 960 DNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGMKALKLTIQPT-PDERF 1023
Fly 1024 LPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGFSL 1061 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 14/47 (30%) |
RCC1 | 59..110 | CDD:278826 | 21/50 (42%) | ||
RCC1 | 114..163 | CDD:278826 | 20/48 (42%) | ||
RCC1 | 167..218 | CDD:278826 | 23/52 (44%) | ||
RCC1 | 221..270 | CDD:278826 | 27/48 (56%) | ||
RCC1 | 273..322 | CDD:278826 | 30/48 (63%) | ||
RCC1_2 | 309..339 | CDD:290274 | 19/29 (66%) | ||
RCC1 | 327..390 | CDD:278826 | 29/62 (47%) | ||
HECTc | 715..1060 | CDD:238033 | 187/345 (54%) | ||
HECTc | 739..1059 | CDD:214523 | 174/320 (54%) | ||
Herc3 | NP_001102101.1 | ATS1 | 2..331 | CDD:227511 | 162/337 (48%) |
RCC1 | 313..377 | CDD:395335 | 29/64 (45%) | ||
HECTc | 702..1048 | CDD:238033 | 187/345 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 355 | 1.000 | Domainoid score | I958 |
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 904 | 1.000 | Inparanoid score | I359 |
OMA | 1 | 1.010 | - | - | QHG57432 | |
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001110 | |
OrthoInspector | 1 | 1.000 | - | - | otm45366 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR45622 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X678 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.940 |