Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008761185.1 | Gene: | Herc6 / 362376 | RGDID: | 1561739 | Length: | 1027 | Species: | Rattus norvegicus |
Alignment Length: | 1063 | Identity: | 351/1063 - (33%) |
---|---|---|---|
Similarity: | 541/1063 - (50%) | Gaps: | 111/1063 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLP--TKRPRMSPFLLIPELQDYVIIQICCGSRH 106
Fly 107 SLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 171
Fly 172 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 236
Fly 237 L--NDETNRSY-PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 298
Fly 299 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSG 363
Fly 364 SALLQSNDSQVSLVIRQIFSGGDQSIVTT------TLFVDKVPPEDFRNYNPKSQILTLTAEVTK 422
Fly 423 QCAQCKQGLQSDMDLLSSIELIFRSQACWNGSFLLDHDRHFGCSVRNH--GLDLKAAQLAFDNLR 485
Fly 486 AVENESIRQVIWDNITKELVGSLVCSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAIFKL 550
Fly 551 AENPRKVLNKWLAQTPAEYFEHLVQ-------NFLHVVIHIISFKMGLAAASPSAERRQQLLP-- 606
Fly 607 ----YN--------TELEIILKLMKTLCQINNERHDRLNYQIFYWPDLSDY-------ADVQQEY 652
Fly 653 VKWIMADTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMAFSFFNYGMPISQFIVL 717
Fly 718 NVTRENLVQDSLRELQHYSQSDLKKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEY 782
Fly 783 EQSRLLWF-ADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKKLLGKPVDLSDLRQLSPP 846
Fly 847 EANSMQSLLDYQGDDFKEVFDLTFEI---SRDVFGEAETKCLKPNGNEIAVTLENRQEFVDLYVD 908
Fly 909 FVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNEDYDWQALQDNCEYREGYTSVDD 973
Fly 974 TIKWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGM--KALKLTIQPTPDERFLPVAHTCFNLLDL 1036
Fly 1037 PRYKTKERLKYKLLQAIQQTQGF 1059 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 5/10 (50%) |
RCC1 | 59..110 | CDD:278826 | 20/52 (38%) | ||
RCC1 | 114..163 | CDD:278826 | 19/48 (40%) | ||
RCC1 | 167..218 | CDD:278826 | 25/50 (50%) | ||
RCC1 | 221..270 | CDD:278826 | 20/51 (39%) | ||
RCC1 | 273..322 | CDD:278826 | 17/48 (35%) | ||
RCC1_2 | 309..339 | CDD:290274 | 12/29 (41%) | ||
RCC1 | 327..390 | CDD:278826 | 12/62 (19%) | ||
HECTc | 715..1060 | CDD:238033 | 138/351 (39%) | ||
HECTc | 739..1059 | CDD:214523 | 127/325 (39%) | ||
Herc6 | XP_008761185.1 | RCC1 | 39..88 | CDD:278826 | 20/53 (38%) |
RCC1 | 92..141 | CDD:278826 | 19/48 (40%) | ||
RCC1 | 144..194 | CDD:278826 | 25/51 (49%) | ||
RCC1_2 | 182..210 | CDD:290274 | 14/27 (52%) | ||
RCC1_2 | 236..265 | CDD:290274 | 11/28 (39%) | ||
RCC1 | 252..299 | CDD:278826 | 17/47 (36%) | ||
HECTc | 682..1023 | CDD:238033 | 136/349 (39%) | ||
HECTc | 706..1023 | CDD:214523 | 127/325 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG57432 | |
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001110 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45622 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X678 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
9 | 8.890 |