| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
| Alignment Length: | 653 | Identity: | 129/653 - (19%) |
|---|---|---|---|
| Similarity: | 221/653 - (33%) | Gaps: | 208/653 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 585 ISFKMGLAAASPSAERRQQLLPYNTELEIILKLMKTLCQINNERHDRLNYQIFYWPDLSDYADVQ 649
Fly 650 QEYVKWIMADTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAA----------TMAFSF 704
Fly 705 FNYGMPISQFIV-------LNVTRENLVQDSLRELQHY--------------SQSDL-------- 740
Fly 741 ------KKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQSRL-LWFA--DLTFE 796
Fly 797 TEN----------------------------------------MYFLIGVLCGLAIYNFTIINLP 821
Fly 822 FPLALFK--------------------------------------KLL----------GKPVDLS 838
Fly 839 DLRQLSPPEANSMQS----LLDYQGDDFKEVFD---------------------------LTFEI 872
Fly 873 --SRDVFGEAETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVI 935
Fly 936 HIFQPEELMAVVVGNEDYDWQALQDNCEYRE---GYTSVDDTIKWFWEVIHDMSEAEKKSFLLFL 997
Fly 998 TGSDRIPIQGMKAL--KLTIQPTPDERF--LPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQG 1058
Fly 1059 FSL 1061 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | |||
| RCC1 | 221..270 | CDD:278826 | |||
| RCC1 | 273..322 | CDD:278826 | |||
| RCC1_2 | 309..339 | CDD:290274 | |||
| RCC1 | 327..390 | CDD:278826 | |||
| HECTc | 715..1060 | CDD:238033 | 102/510 (20%) | ||
| HECTc | 739..1059 | CDD:214523 | 94/464 (20%) | ||
| Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
| ANK | 396..509 | CDD:238125 | |||
| ANK repeat | 422..453 | CDD:293786 | |||
| ANK repeat | 455..484 | CDD:293786 | |||
| F5_F8_type_C | 1173..1298 | CDD:329041 | |||
| MIB_HERC2 | 1333..1389 | CDD:310955 | |||
| DamX | 1576..>1725 | CDD:330571 | |||
| HECTc | 2265..2725 | CDD:238033 | 95/474 (20%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45446940 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.830 | |||||