Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285288.1 | Gene: | HUWE1 / 32510 | FlyBaseID: | FBgn0030674 | Length: | 5151 | Species: | Drosophila melanogaster |
Alignment Length: | 1084 | Identity: | 234/1084 - (21%) |
---|---|---|---|
Similarity: | 392/1084 - (36%) | Gaps: | 334/1084 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 KVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQIC---CGSRHSLALSDWGQVLSWGD 121
Fly 122 N---------DCGQLGHA-----TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSW 172
Fly 173 GSNIYGQLGVNSPNDLTHCNYPLRLTTLLG---IPLAAIACG-------GNHSFLISKSGAVFGW 227
Fly 228 GRNNCG-QLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSV--FLTNEGGVFTCGAGAYGQLGH 289
Fly 290 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 354
Fly 355 IGPWVSPSGSALLQSNDSQVSLVIRQIFSG-GDQSIVTTTLFVDKVPPEDFRNYNPK-SQILTLT 417
Fly 418 AEVTKQCAQCKQGLQSDMDLLSSIELIFRSQACWNGSFLLDHDRHFGCSVRN--------HGLDL 474
Fly 475 KAAQLA-------------------FDNLRAVENESIRQVIWDNITKELVGS----LVCSPADVE 516
Fly 517 SMRLYLLLPLYHEF-VNSKHYKSLQVPFANAIFKLAENPRKVLNKWLAQTPAEYFEHLVQNFLHV 580
Fly 581 VIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKLMKTLCQINNERHDRLNYQIFYWPDLSDY 645
Fly 646 ADVQQEYVKWIMADTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMAFSFFNYGMP 710
Fly 711 ISQFIVLNVTRENLVQDSLRELQHYSQSDLKKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPK 775
Fly 776 YGMFKEYEQSRLLWFADLTFETEN---MYF-LIGVLCGLAIYNFTIINLPFPLALFKKLLGKPVD 836
Fly 837 LSDLRQLSPPEANSMQSLLDYQGDDF---KEV----FDLTFEISRDVFGEAETKCLKPNGNEIAV 894
Fly 895 TLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNEDYDWQALQ 959
Fly 960 DNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGMKALK-----LTIQPTP 1019
Fly 1020 DERF---LPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQ-TQGF 1059 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | 10/52 (19%) | ||
RCC1 | 114..163 | CDD:278826 | 13/62 (21%) | ||
RCC1 | 167..218 | CDD:278826 | 10/60 (17%) | ||
RCC1 | 221..270 | CDD:278826 | 11/51 (22%) | ||
RCC1 | 273..322 | CDD:278826 | 8/48 (17%) | ||
RCC1_2 | 309..339 | CDD:290274 | 6/29 (21%) | ||
RCC1 | 327..390 | CDD:278826 | 14/63 (22%) | ||
HECTc | 715..1060 | CDD:238033 | 111/365 (30%) | ||
HECTc | 739..1059 | CDD:214523 | 103/339 (30%) | ||
HUWE1 | NP_001285288.1 | DUF908 | 90..326 | CDD:283630 | |
DUF913 | 621..989 | CDD:283642 | |||
UBA_like_SF | 1467..1506 | CDD:304366 | |||
WWE | 1756..1828 | CDD:128922 | |||
40S_SA_C | 3575..3651 | CDD:292740 | |||
DUF4414 | 3675..3779 | CDD:291075 | |||
HECTc | 4796..5149 | CDD:238033 | 111/363 (31%) | ||
HECTc | 4820..5148 | CDD:214523 | 103/337 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45446936 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |