Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001001943.1 | Gene: | smurf1 / 321695 | ZFINID: | ZDB-GENE-040426-2744 | Length: | 731 | Species: | Danio rerio |
Alignment Length: | 378 | Identity: | 128/378 - (33%) |
---|---|---|---|
Similarity: | 198/378 - (52%) | Gaps: | 55/378 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 717 LNVTRENLVQDSLRELQHYSQSDLKKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKE 781
Fly 782 YEQSRLLWFADLTFETENMYFL------------------IGVLCGLAIYNFTIINLPFPLALFK 828
Fly 829 KLLGKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLTFEISRDVFGEAETKCLKPNGNEIA 893
Fly 894 VTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVV--VGNEDY-DW 955
Fly 956 QALQDNCEYREGYTSVDDTI-KWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGMKALKLTIQPTP 1019
Fly 1020 DERF-----------LPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGFSL 1061 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | |||
RCC1 | 167..218 | CDD:278826 | |||
RCC1 | 221..270 | CDD:278826 | |||
RCC1 | 273..322 | CDD:278826 | |||
RCC1_2 | 309..339 | CDD:290274 | |||
RCC1 | 327..390 | CDD:278826 | |||
HECTc | 715..1060 | CDD:238033 | 127/375 (34%) | ||
HECTc | 739..1059 | CDD:214523 | 121/352 (34%) | ||
smurf1 | NP_001001943.1 | C2_Smurf-like | 14..138 | CDD:176028 | |
WW | 234..266 | CDD:197736 | |||
WW | 280..312 | CDD:197736 | |||
HECTc | 373..728 | CDD:238033 | 126/374 (34%) | ||
HECTc | 397..728 | CDD:214523 | 121/352 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |