| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038939619.1 | Gene: | Trip12 / 316575 | RGDID: | 1306607 | Length: | 2074 | Species: | Rattus norvegicus |
| Alignment Length: | 402 | Identity: | 107/402 - (26%) |
|---|---|---|---|
| Similarity: | 177/402 - (44%) | Gaps: | 71/402 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 719 VTRENLVQDSLRELQHYSQSDLKKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFK--- 780
Fly 781 -------------EYEQSRLLWFADLTF----------ETENMYFLIGVLCGLAIYNFTIINLPF 822
Fly 823 PLALFKKLLGKPVDLS--DLRQLSPPEANSMQSL---------LDYQGDDFKE------------ 864
Fly 865 ---VFDLTFEISRDVFGEAETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGF 926
Fly 927 MKVCSGRVIHIFQPEELMAVVVGNEDYDWQA--LQDNCEYREGYTSVDDTIKWFWEVIHDMSEAE 989
Fly 990 KKSFLLFLTGSDRIPIQGMKALK--LTI-------QPTPDERFLPVAHTCFNLLDLPRYKTKERL 1045
Fly 1046 KYKLLQAIQQTQ 1057 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | |||
| RCC1 | 221..270 | CDD:278826 | |||
| RCC1 | 273..322 | CDD:278826 | |||
| RCC1_2 | 309..339 | CDD:290274 | |||
| RCC1 | 327..390 | CDD:278826 | |||
| HECTc | 715..1060 | CDD:238033 | 107/402 (27%) | ||
| HECTc | 739..1059 | CDD:214523 | 101/382 (26%) | ||
| Trip12 | XP_038939619.1 | SRP1 | 489..>714 | CDD:227396 | |
| WWE | 814..876 | CDD:397111 | |||
| HECTc | 1672..2072 | CDD:238033 | 107/402 (27%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.900 | |||||