Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008762291.1 | Gene: | Hectd3 / 313525 | RGDID: | 1309823 | Length: | 861 | Species: | Rattus norvegicus |
Alignment Length: | 339 | Identity: | 85/339 - (25%) |
---|---|---|---|
Similarity: | 141/339 - (41%) | Gaps: | 56/339 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 726 QDSLREL-QHYSQSDLKKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLL--DPKYGMFKEYEQSRL 787
Fly 788 LWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKKLLGKPVDLS-DLRQLSPPEANSM 851
Fly 852 QSLLDYQGDDFKEVFDLTF--EIS-RDVFGEAETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNK 913
Fly 914 SVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNEDYDWQALQDNCEYREGYTSVDDTIKWF 978
Fly 979 WEVIHDMSEAEKKSFLLFLTGSDRIPIQGMKALKLTIQP------TPDERFLPVAHTCFNLLDLP 1037
Fly 1038 RYKT----KERLKY 1047 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | |||
RCC1 | 167..218 | CDD:278826 | |||
RCC1 | 221..270 | CDD:278826 | |||
RCC1 | 273..322 | CDD:278826 | |||
RCC1_2 | 309..339 | CDD:290274 | |||
RCC1 | 327..390 | CDD:278826 | |||
HECTc | 715..1060 | CDD:238033 | 85/339 (25%) | ||
HECTc | 739..1059 | CDD:214523 | 81/325 (25%) | ||
Hectd3 | XP_008762291.1 | APC10-HECTD3 | 238..371 | CDD:176487 | |
HECT | 579..845 | CDD:395507 | 77/305 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |