Protein Alignment Herc4 and Wwtr1

DIOPT Version :9

• Sequence 1: NP_001261249.1
• Gene: Herc4 / 38151
• FlyBaseID: FBgn0035207
• Length: 1062
• Species: Drosophila melanogaster
• Sequence 2: NP_001020040.1
• Gene: Wwtr1 / 295062
• RGDID: 1559609
• Length: 395
• Species: Rattus norvegicus
• Alignment Length: 99
• Identity: 26/99 - (26%)
• Similarity: 35/99 - (35%)
• Gaps: 31/99 - (31%)

  Fly   356 GPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQSIVTTTLFVDKVPPEDF--------RNYNPKSQ 412
            ||:.|..     ||.||.:.|        |..|:.||        ||||        ...|....
  Rat   298 GPYHSRE-----QSTDSGLGL--------GCYSVPTT--------PEDFLSNMDEMDTGENSGQT 341

  Fly   413 ILTLTAEVTK--QCAQCKQGLQSDMDLLSSIELI 444
            .:|:..:.|:  ....|..|...|:..|.|.:||
  Rat   342 PMTVNPQQTRFPDFLDCLPGTNVDLGTLESEDLI 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Herc4	NP_001261249.1	RCC1	6..55	CDD:278826
		RCC1	59..110	CDD:278826
		RCC1	114..163	CDD:278826
		RCC1	167..218	CDD:278826
		RCC1	221..270	CDD:278826
		RCC1	273..322	CDD:278826
		RCC1_2	309..339	CDD:290274
		RCC1	327..390	CDD:278826	10/33 (30%)
		HECTc	715..1060	CDD:238033
		HECTc	739..1059	CDD:214523
Wwtr1	NP_001020040.1	WW	125..156	CDD:197736

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5021
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900