| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001099654.1 | Gene: | Wwp2 / 291999 | RGDID: | 1310091 | Length: | 870 | Species: | Rattus norvegicus |
| Alignment Length: | 540 | Identity: | 144/540 - (26%) |
|---|---|---|---|
| Similarity: | 229/540 - (42%) | Gaps: | 107/540 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 571 EHLVQNFLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKLMKTLCQINNERHDRLNYQ 635
Fly 636 IFY---------WPDLSDYADVQQEYVK--WIMADTARDFNICNYSFIFDQSAKTALLQADQALQ 689
Fly 690 MHSAMANAATMA-----------FSFFNYGMPISQFIVLNVTRENLVQDSLRELQHYSQSDLKKP 743
Fly 744 LKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQSRLLWFADLTFETENMYFL----- 803
Fly 804 -------------IGVLCGLAIYNFTIINLPFPLALFKKLLGKPVDLSDLRQLSPPEANSM---- 851
Fly 852 QSLLDYQGDDFKEVFDLTFEISRDVFGEAETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVE 916
Fly 917 LHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNEDYDWQALQDNCEYREGYTSVDDTIKWFWEV 981
Fly 982 IHDMSEAEKKSFLLFLTGSDRIPIQGMKAL-------KLTIQPTPDERFLPVAHTCFNLLDLPRY 1039
Fly 1040 KTKERLKYKLLQAIQQTQGF 1059 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | |||
| RCC1 | 221..270 | CDD:278826 | |||
| RCC1 | 273..322 | CDD:278826 | |||
| RCC1_2 | 309..339 | CDD:290274 | |||
| RCC1 | 327..390 | CDD:278826 | |||
| HECTc | 715..1060 | CDD:238033 | 120/374 (32%) | ||
| HECTc | 739..1059 | CDD:214523 | 113/348 (32%) | ||
| Wwp2 | NP_001099654.1 | C2_E3_ubiquitin_ligase | 17..142 | CDD:175988 | |
| WW | 302..331 | CDD:278809 | |||
| WW | 332..361 | CDD:278809 | |||
| WW | 407..435 | CDD:278809 | 7/56 (13%) | ||
| WW | 447..477 | CDD:238122 | 6/35 (17%) | ||
| HECTc | 516..868 | CDD:238033 | 120/373 (32%) | ||
| HECTc | 539..867 | CDD:214523 | 113/348 (32%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||