| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038952600.1 | Gene: | Nedd4l / 291553 | RGDID: | 735047 | Length: | 1259 | Species: | Rattus norvegicus |
| Alignment Length: | 358 | Identity: | 126/358 - (35%) |
|---|---|---|---|
| Similarity: | 198/358 - (55%) | Gaps: | 21/358 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 717 LNVTRENLVQDSLRELQHYSQSD-LKKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFK 780
Fly 781 EYEQS-----RLLWFADLTFETENMYF-LIGVLCGLAIYNFTIINLPFPLALFKKLLGKPVDLSD 839
Fly 840 LRQLSPPEANSMQSLLDYQGDDFKEVFDLTFEISRDVFGEAETKCLKPNGNEIAVTLENRQEFVD 904
Fly 905 LYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNEDYDWQALQDNCEYREGYT 969
Fly 970 SVDDTIKWFWEVIHDMSEAEKKSFLL-FLTGSDRIPIQGMKAL-------KLTIQPTPDERFLPV 1026
Fly 1027 AHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGF 1059 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | |||
| RCC1 | 221..270 | CDD:278826 | |||
| RCC1 | 273..322 | CDD:278826 | |||
| RCC1_2 | 309..339 | CDD:290274 | |||
| RCC1 | 327..390 | CDD:278826 | |||
| HECTc | 715..1060 | CDD:238033 | 126/358 (35%) | ||
| HECTc | 739..1059 | CDD:214523 | 120/334 (36%) | ||
| Nedd4l | XP_038952600.1 | C2 | <365..418 | CDD:417471 | |
| WW | 463..489 | CDD:395320 | |||
| WW | 653..682 | CDD:395320 | |||
| WW | 766..796 | CDD:238122 | |||
| WW | 815..865 | CDD:197736 | |||
| HECTc | 926..1255 | CDD:214523 | 120/334 (36%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.810 | |||||