DRSC/TRiP Functional Genomics Resources

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Protein Alignment Herc4 and Hectd2

DIOPT Version :10

Sequence 1:NP_001261249.1 Gene:Herc4 / 38151 FlyBaseID:FBgn0035207 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_001156943.1 Gene:Hectd2 / 226098 MGIID:2442663 Length:775 Species:Mus musculus


Alignment Length:790 Identity:239/790 - (30%)
Similarity:368/790 - (46%) Gaps:91/790 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 RHTLALVPSRGRVYAFGLGSSGQLGTRST--KSLMLPQVVIGPWVSPSGSALLQSNDSQ----VS 375
            |..|..:.:.|.......||.||:.|.|:  .::...:.......||:..||....:.:    :.
Mouse    31 REKLPPIVTAGAAAGLDRGSKGQISTFSSFVSTVTQKKEAAENRSSPTHLALPNIRNVRDLPPIC 95

  Fly   376 LVIRQIFSGGDQSIVTTTLFVD-KVPP-------------EDFRNYNPKSQILTLTAEVTKQCAQ 426
            |.:||     .|.:....|..: ||||             :||.....|       ||.|.....
Mouse    96 LDVRQ-----KQRMSVEALPSEVKVPPLPEPSLPSQPKTVKDFEEDLEK-------AEATGNWKT 148

  Fly   427 CKQGLQSDMDLLSSIELIFRSQACWNGSFLLDHDRHFGCSVRNHGLDLKAAQLAFDNLRAVENES 491
            ......:..|..:.:...|:..|  ..||         .::.:.||:.......||.|.     :
Mouse   149 VHAFYITAFDSFTELNTAFKKDA--TASF---------NTIEDSGLNANLVNAVFDALL-----N 197

  Fly   492 IRQVIWDNITKELVGSLV---CSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAIFKLA-- 551
            ..|.|..::.|.::.||:   ..|...:.:|.|.:|....:|    :..|..|.:|:.:.::|  
Mouse   198 TPQDIQKSVLKGIINSLLQEWKGPRTKDDLRAYFILLQNPQF----NITSTYVIYAHLLRQIATL 258

  Fly   552 -ENPRKVLNKWLAQTPAEYFEHLVQNFLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIIL 615
             |.....|..||.:...:.|:.||:..|..|      .:.|..|.|  |....|......:....
Mouse   259 VEADHHFLVHWLKKLSQKKFKQLVERLLQFV------SLRLFPAKP--EEFPPLTKCTWWIPSAA 315

  Fly   616 KLMKTLCQINNERHDRL-NYQIFYWPDLSDYADVQQEYVKW-IMADTARDFNICNYSFIFDQSAK 678
            |::..|...||..|..| .|..||...| |:.|:.:||..| ...::...|:.|.|.|:...:||
Mouse   316 KVLALLNTANNLVHPPLVPYTDFYNSTL-DHIDLMEEYHTWQSFGNSHSRFSFCQYPFVISIAAK 379

  Fly   679 TALLQADQALQMHSAMANAATMAFSFFNYGMPISQFIVLN--VTRENLVQDSLRELQHYSQSDLK 741
            ..::|.|...||.|....:.....|  ....|....:.||  |.|.:||.|||.||.. .::|||
Mouse   380 KIIIQRDSEQQMISIARQSLVDKVS--RRQRPDMNMLFLNMKVRRTHLVSDSLDELTR-KRADLK 441

  Fly   742 KPLKIKFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQSRLLWFADLTFETENMYFLIGV 806
            |.||:.|.||...|.||:.||:|:||::.:..|.||||..::.|...||:....:..:.:.|:|:
Mouse   442 KKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGI 506

  Fly   807 LCGLAIYNFTIINLPFPLALFKKLLGKP--------------VDLSDLRQLSPPEANSMQSLLDY 857
            |.|||:||...:::.||...:||||..|              |.:.||.|:.|..|:.::.||.|
Mouse   507 LMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGICSVTIDDLCQVMPELAHGLKELLSY 571

  Fly   858 QGDDFKEVFDLTFEISRDVFGEAETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAF 922
            :| :.:|.|..||::.::.||..::..|||.|::|.||.:||:|:|.||.||:.|||:...:.||
Mouse   572 EG-NVEEDFYSTFQVFQEEFGVIKSYNLKPGGDKIPVTNQNRREYVQLYTDFLLNKSIYKQFAAF 635

  Fly   923 HKGFMKVCSGRVIHIFQPEELMAVVVGNEDYDWQALQDNCEYREGYTSVDDTIKWFWEVIHDMSE 987
            :.||..||:...:.:.:|||:..:|.|:.:.|..|||.:.:| :||...|.||::||:|:.....
Mouse   636 YCGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQRSTQY-DGYAKTDLTIRYFWDVVLGFPL 699

  Fly   988 AEKKSFLLFLTGSDRIPIQGMKALKLTIQPT-PDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQ 1051
            ..:|..|.|.|||||:|:.||..|...|... ....:|||||||||.|.||.||:|:.||.||:.
Mouse   700 ELQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNWLPVAHTCFNQLCLPPYKSKKDLKQKLII 764

  Fly  1052 AIQQTQGFSL 1061
            .|..::||.|
Mouse   765 GISNSEGFGL 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Herc4NP_001261249.1 ATS1 7..352 CDD:444065 9/36 (25%)
RCC1 327..390 CDD:395335 15/68 (22%)
HECTc 715..1060 CDD:238033 143/361 (40%)
Hectd2NP_001156943.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51 4/19 (21%)
HECTc 416..773 CDD:238033 143/359 (40%)

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