DRSC/TRiP Functional Genomics Resources

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Protein Alignment Herc4 and Nek9

DIOPT Version :9

Sequence 1:NP_001261249.1 Gene:Herc4 / 38151 FlyBaseID:FBgn0035207 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_660120.2 Gene:Nek9 / 217718 MGIID:2387995 Length:984 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Herc4NP_001261249.1 RCC1 6..55 CDD:278826
RCC1 59..110 CDD:278826
RCC1 114..163 CDD:278826
RCC1 167..218 CDD:278826
RCC1 221..270 CDD:278826
RCC1 273..322 CDD:278826
RCC1_2 309..339 CDD:290274
RCC1 327..390 CDD:278826
HECTc 715..1060 CDD:238033
HECTc 739..1059 CDD:214523
Nek9NP_660120.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..43
STKc_Nek9 51..296 CDD:270860
S_TKc 52..296 CDD:214567
RCC1 1 388..444
RCC1 389..441 CDD:278826
RCC1 444..495 CDD:278826
RCC1 2 445..498
RCC1 3 499..550
RCC1 500..547 CDD:278826
RCC1 4 551..615
RCC1 5 616..668
RCC1 616..664 CDD:278826
RCC1 6 669..726
Interaction with NEK6. /evidence=ECO:0000250 732..896
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 744..790
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 940..984
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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