Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006512697.1 | Gene: | Hace1 / 209462 | MGIID: | 2446110 | Length: | 921 | Species: | Mus musculus |
Alignment Length: | 833 | Identity: | 199/833 - (23%) |
---|---|---|---|
Similarity: | 346/833 - (41%) | Gaps: | 160/833 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 301 VMELMGSTITQVACGNRH--TLALVPSRGR----------------------VYAFGLGSSGQLG 341
Fly 342 TRSTKSLMLPQVVIGPWVSPSGSAL------LQSNDSQVSLVIRQIFSGGDQSIVTTTLFVDKVP 400
Fly 401 PEDFR-----------NYNPKSQ---ILTLTAEVTKQCAQCKQGLQSDMDL-LSSIELIFRSQAC 450
Fly 451 WNGSFLLDHDRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIR--QVIWDNITKELVGSLVCS-- 511
Fly 512 ------PADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAIFKLA-----ENPRKVLNKWLAQT 565
Fly 566 PAEYFEHLVQNFLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKLMKTLCQINNERHD 630
Fly 631 RLNYQIFYWPDLSDYADVQQEYVKWIMADTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMA 695
Fly 696 NAATMAFSFFNYGMPISQFIVLNVTRENLVQDSLRELQHYSQSDLKKPLKIKFHGEEAEDAGGVR 760
Fly 761 KEFFMLLLKDLLDPKYGMFKEYEQSRLLWFAD-LTFETE----------NMYFLIGVLCGLAIYN 814
Fly 815 FTIINLPFPLALFKKLLGKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEV-FDLTFEISRDVFG 878
Fly 879 EAETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEEL 943
Fly 944 MAVVVGNEDYDWQALQDNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLLFLTGSDRIP---- 1004
Fly 1005 --IQGMKALK-LTIQPTP-DERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAI 1053 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | |||
RCC1 | 167..218 | CDD:278826 | |||
RCC1 | 221..270 | CDD:278826 | |||
RCC1 | 273..322 | CDD:278826 | 10/22 (45%) | ||
RCC1_2 | 309..339 | CDD:290274 | 8/53 (15%) | ||
RCC1 | 327..390 | CDD:278826 | 14/90 (16%) | ||
HECTc | 715..1060 | CDD:238033 | 116/359 (32%) | ||
HECTc | 739..1059 | CDD:214523 | 112/335 (33%) | ||
Hace1 | XP_006512697.1 | ANK repeat | 66..95 | CDD:293786 | |
Ank_2 | 69..194 | CDD:372319 | 11/34 (32%) | ||
ANK repeat | 97..128 | CDD:293786 | |||
ANK repeat | 130..161 | CDD:293786 | 1/1 (100%) | ||
ANK repeat | 163..194 | CDD:293786 | 10/30 (33%) | ||
Ank_2 | 168..263 | CDD:372319 | 18/100 (18%) | ||
ANK repeat | 196..233 | CDD:293786 | 6/42 (14%) | ||
HECTc | 566..915 | CDD:238033 | 116/358 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |