Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001317872.1 | Gene: | hecw-1 / 175438 | WormBaseID: | WBGene00009738 | Length: | 1247 | Species: | Caenorhabditis elegans |
Alignment Length: | 699 | Identity: | 173/699 - (24%) |
---|---|---|---|
Similarity: | 289/699 - (41%) | Gaps: | 117/699 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 393 TLFVDKVPPE-------DFRNYNPKSQILTLTAEVTKQCAQCKQGLQSDMDLLSSIEL-IFRSQA 449
Fly 450 CWNGSFLLDHDRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIRQVIWDNITKELVGSLVCSPAD 514
Fly 515 VESMRLYLLLPLYHEFVNSKHYKSLQVPFANAIFKLAENPRKV-LNKWLAQTPAEYFEHLVQNFL 578
Fly 579 HVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKL--MKTLCQINNERHDRLNYQIFYWPD 641
Fly 642 LSDYADVQ----QEYVKWIMADTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMAF 702
Fly 703 SFFNYGMPISQFIVLNVTRENLVQDSLRELQHYSQSDLKKP-LKIKFHGEEAEDAGGVRKEFFML 766
Fly 767 LLKDLLDPKYGMFKEYEQSRL-LWFADLTFETENMYFLIGVLCG----LAIYNFTIINLPFPLAL 826
Fly 827 FKKLLGKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDL--TFEISRDVFGEAETKCLKPNG 889
Fly 890 NEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNEDYD 954
Fly 955 WQALQDNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGMKAL-------K 1012
Fly 1013 LTIQPTPDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGFSL 1061 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | |||
RCC1 | 167..218 | CDD:278826 | |||
RCC1 | 221..270 | CDD:278826 | |||
RCC1 | 273..322 | CDD:278826 | |||
RCC1_2 | 309..339 | CDD:290274 | |||
RCC1 | 327..390 | CDD:278826 | |||
HECTc | 715..1060 | CDD:238033 | 119/359 (33%) | ||
HECTc | 739..1059 | CDD:214523 | 114/334 (34%) | ||
hecw-1 | NP_001317872.1 | FBA_2 | 230..285 | CDD:311601 | |
WW | 603..634 | CDD:197736 | |||
WW | 746..777 | CDD:197736 | 7/32 (22%) | ||
HECTc | 918..1244 | CDD:214523 | 114/333 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |