Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_473434.2 | Gene: | Ube3b / 117146 | MGIID: | 1891295 | Length: | 1070 | Species: | Mus musculus |
Alignment Length: | 905 | Identity: | 192/905 - (21%) |
---|---|---|---|
Similarity: | 317/905 - (35%) | Gaps: | 229/905 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 265 EFSVFLTN-----------EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRH 318
Fly 319 TLALVPSR-----------GRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSNDS 372
Fly 373 QVSLVIRQIFSGGDQSIVTTTLFVDKVP------PEDFRNYNPKSQILTL--------------- 416
Fly 417 ------TAEVTKQCAQCKQGLQSDMDLLSSIELIFRSQACWNGSFLLDHDRHFGCSVRNHGLDLK 475
Fly 476 AAQLAFDNLRAVENESIRQVIWDNITKELVGSLV----CSP------ADVESMRLYLLLPLYHEF 530
Fly 531 VNSKHYKSLQV-PFANA-IFKLAENPRKVLNKWLAQTPAEYFEHLVQNFLHVVIHIISFKMGLAA 593
Fly 594 ASPSAERRQQLLPYNTELEIILKLMKTLCQINNERHDRLNYQIFYWPDLSDYADVQQEYVKWIMA 658
Fly 659 DTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMAFSFFNYGMPISQFIV-LNVTRE 722
Fly 723 NLVQDSLRELQHYSQSDLKKPLKIKFHG-----EEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEY 782
Fly 783 EQSRLLWFADLTFETEN---MYFLIGVLCGLAIYNFTIINLPFPLALFKKLLG-------KPVDL 837
Fly 838 SDLRQLSPPEANSMQSLLDYQGDDFKEVFD--LTFEISRDVFGEAETKCLKPNGNEIAVTLENRQ 900
Fly 901 EFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVG-NEDYDWQALQDNCEY 964
Fly 965 REGYTSVDDTIKWFWEVI-HDMSEAEKKSFLLFLTGSDRIPIQGMKALK---------------- 1012
Fly 1013 -----------LTIQPTPDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGFSL 1061 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | |||
RCC1 | 167..218 | CDD:278826 | |||
RCC1 | 221..270 | CDD:278826 | 2/4 (50%) | ||
RCC1 | 273..322 | CDD:278826 | 13/48 (27%) | ||
RCC1_2 | 309..339 | CDD:290274 | 8/40 (20%) | ||
RCC1 | 327..390 | CDD:278826 | 12/62 (19%) | ||
HECTc | 715..1060 | CDD:238033 | 102/391 (26%) | ||
HECTc | 739..1059 | CDD:214523 | 96/365 (26%) | ||
Ube3b | NP_473434.2 | HECTc | 684..1068 | CDD:238033 | 102/389 (26%) |
HECTc | 709..1067 | CDD:214523 | 96/363 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |