| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_598668.1 | Gene: | Ube3c / 100763 | MGIID: | 2140998 | Length: | 1083 | Species: | Mus musculus |
| Alignment Length: | 805 | Identity: | 191/805 - (23%) |
|---|---|---|---|
| Similarity: | 309/805 - (38%) | Gaps: | 247/805 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 401 PEDFRNYNPKSQILTLTAEVTKQCAQ---CKQGLQSDMDLL---SSIELIFRSQACWNGSFLLDH 459
Fly 460 DRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIRQVIWDNI----TKELVGSLV--------CSP 512
Fly 513 ADVE-SMRLYLLLPLYHEFVNSKHYKSLQVPFANAIFKLAENPRKVLNKWLAQTPAEYFEHLVQN 576
Fly 577 FLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIIL--KLMKTLCQINNERHDRLNYQIFYW 639
Fly 640 PDLSDYADVQQEYV-----------------------KWIM--------------ADTARDFNIC 667
Fly 668 NYSFIFDQSAKTALLQADQALQMHSAMANAATMAFSFFNYG---------------MPIS----- 712
Fly 713 --------QFIV-----------------------------LNVT--RENLVQDSLRELQHYSQS 738
Fly 739 DLKKPLKIKF---HG--EEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQSRLLW--------- 789
Fly 790 ---FADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKKLLG--KPVDLSDLRQLSPPEAN 849
Fly 850 SMQSLLDYQGDDFKEVFDLTFEISRDVFGEAETKCLKPNGNEIAVTLENRQEFVDLYVDFVFNKS 914
Fly 915 VELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNE-DYDWQALQDNCEYREGYTSVDDTIKWF 978
Fly 979 WEVIHDMSEAEKKSFLLFLTGSDRIPIQGMKALKLTIQPT-------PDERFLPVAHTCFNLLDL 1036
Fly 1037 PRYKTKERLKYKLLQAIQQTQGFSL 1061 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
| RCC1 | 59..110 | CDD:278826 | |||
| RCC1 | 114..163 | CDD:278826 | |||
| RCC1 | 167..218 | CDD:278826 | |||
| RCC1 | 221..270 | CDD:278826 | |||
| RCC1 | 273..322 | CDD:278826 | |||
| RCC1_2 | 309..339 | CDD:290274 | |||
| RCC1 | 327..390 | CDD:278826 | |||
| HECTc | 715..1060 | CDD:238033 | 115/402 (29%) | ||
| HECTc | 739..1059 | CDD:214523 | 107/346 (31%) | ||
| Ube3c | NP_598668.1 | Cis-determinant of acceptor ubiquitin-binding. /evidence=ECO:0000250 | 1..60 | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..40 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 354..386 | 3/4 (75%) | |||
| HECTc | 723..1081 | CDD:238033 | 114/371 (31%) | ||
| HECTc | 747..1080 | CDD:214523 | 107/346 (31%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||