Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005160166.1 | Gene: | herc5.4 / 100148091 | ZFINID: | ZDB-GENE-090311-7 | Length: | 995 | Species: | Danio rerio |
Alignment Length: | 1110 | Identity: | 362/1110 - (32%) |
---|---|---|---|
Similarity: | 539/1110 - (48%) | Gaps: | 182/1110 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 WGSTSHGQLGLGGIEDEQILTPS-QIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLG 73
Fly 74 HDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQL 138
Fly 139 PKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI 203
Fly 204 PLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSV 268
Fly 269 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFG 333
Fly 334 LGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQSIVTTTLFVDK 398
Fly 399 VPPEDFRNYNPKS----QILTLTAEVTKQCAQCKQGLQSD--MDLLSSIELIFRSQACWNGSFL- 456
Fly 457 LDHDRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIRQVIWDNITKELVGSLVCSPADVESMRLY 521
Fly 522 LLLPLYHEFVN--SKHYKSLQVPFANAIFKLAENPRKVLNKWLAQTPAEYFEHLVQNF------- 577
Fly 578 ---------------LHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEII------LKLMKTL 621
Fly 622 CQINNERHDRLNYQIFY---------WPDLSDYADVQQEYVKWIMADTARDFNICNYSFIFDQSA 677
Fly 678 KTALLQADQALQMHSAMANAATMAF--SFFNYGMPISQFIVLNVTRENLVQDSLRELQHYSQSDL 740
Fly 741 KKPLKIKFHGEEAEDAGGVRKEFFMLLLKDLL--DPKYGMFKEYEQSRLLWF-ADLTFETENMYF 802
Fly 803 LIGVLCGLAIYNFTIINLPFPLALFKKLLGKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEVFD 867
Fly 868 LTFEISRDVFGEAETKC----LKPNGNEIAVTLENRQEFVDLYVDFVFNKSVELHYNAFHKGFMK 928
Fly 929 VCSGRVIHIFQPEELMAVVVGNEDYDWQALQDNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSF 993
Fly 994 LLFLTGSDRIPIQGM--KALKL--TIQPTPDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQ 1054
Fly 1055 QTQGF 1059 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 12/45 (27%) |
RCC1 | 59..110 | CDD:278826 | 12/50 (24%) | ||
RCC1 | 114..163 | CDD:278826 | 15/48 (31%) | ||
RCC1 | 167..218 | CDD:278826 | 23/50 (46%) | ||
RCC1 | 221..270 | CDD:278826 | 22/48 (46%) | ||
RCC1 | 273..322 | CDD:278826 | 25/48 (52%) | ||
RCC1_2 | 309..339 | CDD:290274 | 12/29 (41%) | ||
RCC1 | 327..390 | CDD:278826 | 13/62 (21%) | ||
HECTc | 715..1060 | CDD:238033 | 144/356 (40%) | ||
HECTc | 739..1059 | CDD:214523 | 136/330 (41%) | ||
herc5.4 | XP_005160166.1 | RCC1_2 | 117..146 | CDD:290274 | 15/28 (54%) |
RCC1 | 133..183 | CDD:278826 | 23/51 (45%) | ||
RCC1 | 186..235 | CDD:278826 | 22/48 (46%) | ||
RCC1 | 239..286 | CDD:278826 | 24/46 (52%) | ||
RCC1 | 294..343 | CDD:278826 | 13/64 (20%) | ||
HECTc | 658..993 | CDD:294058 | 144/354 (41%) | ||
HECTc | 682..992 | CDD:214523 | 136/327 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG57432 | |
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001110 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45622 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X678 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.890 |