DRSC/TRiP Functional Genomics Resources

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Protein Alignment sturkopf and LDAH

DIOPT Version :9

Sequence 1:NP_612097.1 Gene:sturkopf / 38150 FlyBaseID:FBgn0035206 Length:307 Species:Drosophila melanogaster
Sequence 2:XP_011531316.1 Gene:LDAH / 60526 HGNCID:26145 Length:331 Species:Homo sapiens


Alignment Length:327 Identity:108/327 - (33%)
Similarity:170/327 - (51%) Gaps:37/327 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQEAYVNINSIPTHIFTWGRWI----EETITEKEIVICI-------TGNPGLPGFYTEFAGTLQK 54
            :.|.::......|.:...|.|.    ::::...:::|.|       .||||...||..||    |
Human    11 VHEEFILCGGAETQVLKCGPWTDLFHDQSVKRPKLLIFIIPGERKSLGNPGFSAFYVPFA----K 71

  Fly    55 ELGDL-----PVWVIGHAGHD-DPPEASIREVPQLSGNEE---LFNLDGQIRHKIAFIEKYVPSD 110
            .|..|     |||.|.||||. .|.:..|....:.|..:|   ::.|:|||.||:||:..:||.|
Human    72 ALYSLTNRRFPVWTISHAGHALAPKDKKILTTSEDSNAQEIKDIYGLNGQIEHKLAFLRTHVPKD 136

  Fly   111 VKIHLIGHSIGAWMILQLLENERI-RSRIQKCYMLFPTVERMMESPNGWVFTKVAMPLYSVFGYI 174
            :|:.|||||||::..||:|  :|: ...:.:.::||||:|||.|||||    ::|.||...|.|:
Human   137 MKLVLIGHSIGSYFTLQML--KRVPELPVIRAFLLFPTIERMSESPNG----RIATPLLCWFRYV 195

  Fly   175 FFSFFNFL----PVWLRLMLIQIYFLIFSIPRQFLGTALKYSKPSVAEKVVFLADDEMARVRGIQ 235
            .:.....|    |..::.:||:....:.::..:|  :.|...:|.......:|...||..|....
Human   196 LYVTGYLLLKPCPETIKSLLIRRGLQVMNLENEF--SPLNILEPFCLANAAYLGGQEMMEVVKRD 258

  Fly   236 REIVEQNLDLLKFYYGTTDGWVPISYYDQLKKDYPKVDAQLDTKKIDHAFVLRHSQPMAVIVRDM 300
            .|.::::|..|.|||||.|.|.|..||:.:|||:|:.|.:|..|.|.|||:...:|.||.::.|.
Human   259 DETIKEHLCKLTFYYGTIDPWCPKEYYEDIKKDFPEGDIRLCEKNIPHAFITHFNQEMADMIADS 323

  Fly   301 IQ 302
            ::
Human   324 LK 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sturkopfNP_612097.1 MhpC 4..304 CDD:223669 107/324 (33%)
DUF2305 28..286 CDD:287232 99/278 (36%)
LDAHXP_011531316.1 DUF2305 43..309 CDD:287232 99/277 (36%)
MhpC 58..325 CDD:223669 102/278 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159481
Domainoid 1 1.000 163 1.000 Domainoid score I3976
eggNOG 1 0.900 - - E1_KOG3975
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41453
Inparanoid 1 1.050 173 1.000 Inparanoid score I4090
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53946
OrthoDB 1 1.010 - - D1163030at2759
OrthoFinder 1 1.000 - - FOG0004310
OrthoInspector 1 1.000 - - oto89264
orthoMCL 1 0.900 - - OOG6_103147
Panther 1 1.100 - - LDO PTHR13390
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2370
SonicParanoid 1 1.000 - - X4098
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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