DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nt5a and Nt5c

DIOPT Version :10

Sequence 1:NP_612095.3 Gene:Nt5a / 38148 FlyBaseID:FBgn0035204 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_610499.2 Gene:Nt5c / 35984 FlyBaseID:FBgn0033426 Length:548 Species:Drosophila melanogaster


Alignment Length:499 Identity:117/499 - (23%)
Similarity:211/499 - (42%) Gaps:90/499 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 AAVGRATREVTGQQQTVRRFHK-SAGGNSRYSASTIMTSYH-------KELLLKDYGIVGFDLDG 121
            |:...||.::: ..:||..|.| ......::.:..:.:..|       .||.|.:..:.|||.|.
  Fly    57 ASAPAATAQIS-HPKTVSDFQKLHEATKKKFQSKKLPSDVHPDAVFACNELDLSEVQVYGFDYDY 120

  Fly   122 TLLRYNLHEMSALIYQVLKQFLVEQKGYDRDLLLQSLNLDFLQKGLFLDGPRGNVLKLSS--EAQ 184
            ||..|. ..:..|:|.:.::.||::..|..|:|......:|..:||..|..:|.::||.|  :.|
  Fly   121 TLACYK-PILEDLLYNLAREMLVKRFRYPEDILQLEYEPNFAVRGLHYDVEKGLLVKLDSFLQLQ 184

  Fly   185 ILRATHG-TRLLSDTEIQAIYGRDRRWEITTAFYRDPLSTWNGDASTQMRSLLDYFDMPSALVFA 248
            :.....| |::.:|..::..:.|    .:..|:...|.:::..:.:::|..|.|.|.:|...:..
  Fly   185 LGSVYRGRTKVEADEVLKLYHNR----LLPIAYVEGPNNSYRHNTNSKMVQLADLFSVPEMCLLC 245

  Fly   249 QAVDLVDRGKKPSAGEEYQ---VWQDVQAGLMNIYSRENFANDQSLYFKSMRAEPERFVLRTDPS 310
            ..::..:|.:     .:|.   |:.|.:..:.:.:        ..::.|.|| ..|:::.| :|.
  Fly   246 NVIEYFERNR-----IDYNPEIVFHDTRTAMGSCH--------PIMHGKVMR-NTEKYIER-NPK 295

  Fly   311 VMNWLGELRKSGKKLFLLTGSNVDFANLTATQALGKDWRKYFDFVVTYAKKPGFFTMQ-RPFMQV 374
            ::.:..:|:::||.|||:|.|...|.|...:..:|.:||.:||.|:..|:||.|||.: ||....
  Fly   296 LVKFFEKLQQAGKNLFLVTNSPYSFVNCGMSFLVGANWRDFFDVVIVQARKPKFFTDESRPIRLF 360

  Fly   375 DVEKLAELPQEADNIKAGEVYSQGNWHQLHTAMAGMLQKKPSEAK------ALYFGDNIIQDVYT 433
            |....:.|......::.|::|.:|:..||            .|.|      .|||||:...|:..
  Fly   361 DERTQSHLWDRVFKLEKGKIYYEGSVRQL------------QELKGWRGHSVLYFGDHPYSDLAD 413

  Fly   434 PVKHRDFDAVAIAEELLLEDGKYPYAAELDSQLWGPYFALDCTPTLWSSFI-----------SSY 487
            ......:...||..||         |.|:.: |....|.:...   |...:           |..
  Fly   414 VTLKHSWRTGAIISEL---------AHEIKT-LNRKDFKMSAN---WLQMLTQLIEDTQDDDSEA 465

  Fly   488 AQLCVPT-VEQVAQTAPDKRIV-----------CHNPYGFSPRL 519
            ||:|:.. :|:..|.....:.|           .|||..||.||
  Fly   466 AQICLKEWMEERDQLRNKTKNVFNEQFGSVFRTYHNPTYFSRRL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nt5aNP_612095.3 HAD_cN-II 102..490 CDD:319824 98/418 (23%)
Nt5cNP_610499.2 5_nucleotid 108..544 CDD:461733 107/447 (24%)

Return to query results.
Submit another query.