DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acat2 and Acaa1b

DIOPT Version :10

Sequence 1:NP_612094.2 Gene:Acat2 / 38147 FlyBaseID:FBgn0035203 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001035108.2 Gene:Acaa1b / 501072 RGDID:1562373 Length:424 Species:Rattus norvegicus


Alignment Length:396 Identity:165/396 - (41%)
Similarity:236/396 - (59%) Gaps:19/396 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDVFIVSAARTPIG-SFNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNEVILGQALSAGQGQNP 65
            |||.:|...||||| :..|........:|.|.|:..||:...::.:.:.::.:|..|..|.|...
  Rat    36 SDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAM 100

  Fly    66 ARQASLKAGLPIQVPAYGINMLCGSGLKTVALGYQAIRSGDAQIVVAGGQESMSLAPHVMHLRQG 130
            ||.|...:|:|..||...:|..|.|||:.||.....||:|...|.:|.|.|||:|:.        
  Rat   101 ARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSE-------- 157

  Fly   131 VKMGPGTMVDSMI-HDGLTDAMENIHMGITAENLADKYNISREAQDAYAVLSQNRAEEAQKKGYF 194
             :..||.:...:: ::...|.:  |.||||:||:|:::.|||:.|||:|:.||.:|..||.||.|
  Rat   158 -RGNPGNISSRLLENEKARDCL--IPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCF 219

  Fly   195 DKEIVPV--EIKDRKG---TTTFSKDEYIKAGSTVEGIQKLRAAFKEGGSITAGNASGVNDSAAA 254
            ..|||||  .:.|.||   |.|.|:||.::..:|:||:.||:.|||:|||.||||:|.|:|.|||
  Rat   220 RAEIVPVTTTVLDDKGDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAA 284

  Fly   255 VLLMSGEEVARKGLKPLARIVGWTQSGIEPKVMGLGPVTAVEALLQKINWKREEVDLYELNEAFA 319
            |||....:....||..|..:..:...|:.|.:||:||..|:.|.|||......::|::|:|||||
  Rat   285 VLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFA 349

  Fly   320 AQSLAVLQDLQLDAQKVNVNGGAIALGHPIGASGARVLVTLLYALERTGGRK-GIASLCIGGGMG 383
            :|:|..::.|.:.|:|||..|||||||||:|.:|||.:||||..|:|.|.|. |:.|:|||.|||
  Rat   350 SQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRAYGVVSMCIGTGMG 414

  Fly   384 IALAVE 389
            .|...|
  Rat   415 AAAVFE 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acat2NP_612094.2 PRK05790 1..391 CDD:180261 165/396 (42%)
Acaa1bNP_001035108.2 PLN02287 1..420 CDD:215161 164/394 (42%)
PTS2-type peroxisomal targeting signal. /evidence=ECO:0000269|PubMed:1680677 1..26
Blue background indicates that the domain is not in the aligned region.

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