DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and RHO2

DIOPT Version :9

Sequence 1:NP_001261247.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_014309.3 Gene:RHO2 / 855634 SGDID:S000005034 Length:192 Species:Saccharomyces cerevisiae


Alignment Length:188 Identity:85/188 - (45%)
Similarity:116/188 - (61%) Gaps:5/188 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRP 69
            |.|::||||.|||.||..:|...||.:|.||||:||..:..||...::|.||||||||:|:||||
Yeast     9 KLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRP 73

  Fly    70 LSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKKL 134
            .||.:.|:.||.|::.|..|..|.|.||..|...:||..||:|||.|.|||.:.:..|...| ::
Yeast    74 FSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATD-EM 137

  Fly   135 APITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQPKSKRKCALL 192
            .||  .....:|:.|||.||:||||||.:|:..||:.|.|:.|....:|.:  .|.::
Yeast   138 VPI--EDAKQVARAIGAKKYMECSALTGEGVDDVFEVATRTSLLMKKEPGA--NCCII 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_001261247.1 Rac1_like 3..176 CDD:206663 82/170 (48%)
RHO2NP_014309.3 Rho2 7..191 CDD:206702 85/186 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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