DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and RHO3

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_012148.1 Gene:RHO3 / 854688 SGDID:S000001380 Length:231 Species:Saccharomyces cerevisiae


Alignment Length:214 Identity:89/214 - (41%)
Similarity:121/214 - (56%) Gaps:26/214 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRP 69
            |.|::||||.|||.||..:|...||..|.||||:||..::.||:|.|.|.||||||||::||||.
Yeast    18 KIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRS 82

  Fly    70 LSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKKL 134
            |||..|...::|||:.:..|.|||:.||..|:..||....::||..|.|||:::|....:....:
Yeast    83 LSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNI 147

  Fly   135 AP---------------------ITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLC 178
            ..                     |:|.:||||||:|||::||||||...||:...|.||.|..|.
Yeast   148 QQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAFTEAARVALT 212

  Fly   179 --PV---LQPKSKRKCALL 192
              ||   ::..|...|.::
Yeast   213 AGPVATEVKSDSGSSCTIM 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 84/191 (44%)
RHO3NP_012148.1 Rho3 17..231 CDD:206706 89/212 (42%)

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