DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and cdc42l

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_956159.1 Gene:cdc42l / 793158 ZFINID:ZDB-GENE-030131-6069 Length:191 Species:Danio rerio


Alignment Length:192 Identity:130/192 - (67%)
Similarity:157/192 - (81%) Gaps:1/192 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65
            ||.|||||||||||||||||||||||.||.||:|||||||:..||:..:|..|||:|||||||||
Zfish     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65

  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLR 130
            ||||||||||||||:|||:|:|:|||||:.||.||:.||||.||.:||||::|||||.||:|||.
Zfish    66 RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCPRTPFLLVGTQVDLRDDSNTVEKLA 130

  Fly   131 DKKLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQPKSKRKCALL 192
            ..|..||:...|..:::::.||||:|||||||:|||.||||||.:.|.|. :.|.|::|.||
Zfish   131 KNKQRPISPESGEKLSRDLRAVKYVECSALTQRGLKNVFDEAILAALEPP-ETKPKKRCVLL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 121/172 (70%)
cdc42lNP_956159.1 Cdc42 3..177 CDD:206664 121/173 (70%)

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