DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and rnd2

DIOPT Version :9

Sequence 1:NP_001261247.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001038829.1 Gene:rnd2 / 751645 ZFINID:ZDB-GENE-030616-177 Length:235 Species:Danio rerio


Alignment Length:189 Identity:75/189 - (39%)
Similarity:117/189 - (61%) Gaps:5/189 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRP 69
            |.|||||...|||.||..:..:.:|..|:||||:||:|:..:|...|.|.:|||:|...||.:||
Zfish    10 KVVVVGDTQCGKTALLHVFAKDNYPENYVPTVFENYTASFEIDKHRIELNMWDTSGSSYYDNVRP 74

  Fly    70 LSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKKL 134
            |:||..|..||||.:..|.:.:::..||..|.:.:||:..::|||.|||:|.|.:|:.:|..::|
Zfish    75 LAYPDCDAVLICFDISRPETLDSITKKWQVEAQEYCPNAKLVLVGCKLDMRTDVSTLRELSKQRL 139

  Fly   135 APITYPQGLAMAKEIGAVKYLECSA-LTQKGLKTVFD----EAIRSVLCPVLQPKSKRK 188
            .|:|:.||...|:|:|||.|:|||: :....::.||.    .::|....|.|:..:.|:
Zfish   140 IPVTHEQGSLRARELGAVAYVECSSRMCVNSVRDVFHITTLVSVRREPAPSLKRSTSRR 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_001261247.1 Rac1_like 3..176 CDD:206663 72/175 (41%)
rnd2NP_001038829.1 Rnd2_Rho7 8..235 CDD:206736 75/189 (40%)
RHO 11..183 CDD:197554 70/171 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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