Protein Alignment Rac1 and rnd1b

DIOPT Version :9

• Sequence 1: NP_001261247.1
• Gene: Rac1 / 38146
• FlyBaseID: FBgn0010333
• Length: 192
• Species: Drosophila melanogaster
• Sequence 2: NP_001037861.1
• Gene: rnd1b / 553414
• ZFINID: ZDB-GENE-060315-7
• Length: 232
• Species: Danio rerio
• Alignment Length: 190
• Identity: 82/190 - (43%)
• Similarity: 117/190 - (61%)
• Gaps: 8/190 - (4%)

  Fly     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRP 69
            |.|:|||...|||.:|.....:.:|..|:||||:||:|.:.:|.:.:.|.||||:|...||.:||
Zfish    15 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLELDDQRVELSLWDTSGSPYYDNVRP 79

  Fly    70 LSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKKL 134
            |.|..:|..|:||.:..|..|::...||..|:...||||.|:|||.|.|||.|..|:.:|.::|.
Zfish    80 LCYSDSDAVLLCFDISRPDIFDSGLKKWRAEILDFCPSTRILLVGCKTDLRTDVCTLMELSNQKQ 144

  Fly   135 APITYPQGLAMAKEIGAVKYLECSALT-QKGLKTVFDEAIRSVLC-----PVLQPKSKRK 188
            .|||:.||.||||::||..||||||.| :|.:.:||..|  ::.|     |:.:|...|:
Zfish   145 TPITHEQGSAMAKQLGAEAYLECSAFTSEKSIHSVFRTA--ALACINKLQPLAKPSPTRR 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rac1	NP_001261247.1	Rac1_like	3..176	CDD:206663	78/171 (46%)
rnd1b	NP_001037861.1	Rnd1_Rho6	1..232	CDD:206737	82/190 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0393
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.810