DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and rhoub

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001017784.2 Gene:rhoub / 550481 ZFINID:ZDB-GENE-050417-308 Length:237 Species:Danio rerio


Alignment Length:170 Identity:94/170 - (55%)
Similarity:126/170 - (74%) Gaps:0/170 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            :|||.:||||||||.|::|||||.:|.:|:||.||::||.|.||.:|:.|.|.|||||:::|:||
Zfish    29 LKCVFLGDGAVGKTSLIVSYTTNGYPTKYVPTAFDDFSAVVQVDGQPVRLQLCDTAGQDEFDKLR 93

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKK 133
            ...|.:|||.|:|||:|:||||:|:..||.||:|..||.||:|||||:.|||.|...:..|..::
Zfish    94 HFCYTRTDVLLLCFSVVSPASFQNIGEKWVPEIRRRCPLTPVILVGTQCDLRQDVKVLIDLARRR 158

  Fly   134 LAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAI 173
            ..|:......|:|.:||||.|:|||:||||.||.|||.||
Zfish   159 ERPVLEEDARALADKIGAVSYIECSSLTQKNLKEVFDAAI 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 94/170 (55%)
rhoubNP_001017784.2 Wrch_1 29..198 CDD:133330 92/168 (55%)

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