DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and cdc42

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001008027.1 Gene:cdc42 / 493389 XenbaseID:XB-GENE-967585 Length:191 Species:Xenopus tropicalis


Alignment Length:192 Identity:132/192 - (68%)
Similarity:155/192 - (80%) Gaps:3/192 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65
            ||.|||||||||||||||||||||||.||.||:|||||||:..||:..:|..|||:|||||||||
 Frog     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65

  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLR 130
            ||||||||||||||:|||:|:|:|||||:.||.||:.||||.||.:||||::|||||.:|||||.
 Frog    66 RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLA 130

  Fly   131 DKKLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVL-CPVLQPKSKRKCAL 191
            ..|..|||......:|:::.||||:|||||||:|||.||||||.:.| .|..||  ||||.:
 Frog   131 KNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFDEAILAALEPPETQP--KRKCCI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 122/172 (71%)
cdc42NP_001008027.1 Cdc42 3..177 CDD:206664 122/173 (71%)

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