DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rac1 and RhoBTB

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster


Alignment Length:203 Identity:78/203 - (38%)
Similarity:110/203 - (54%) Gaps:30/203 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QAIKCVVVGDGAVGKTCLLISYTTN------AFPGEYIPTVF--DNYS--ANVM------VDAKP 50
            :.:|||:|||.|||||.|:.:...|      .....::|||:  |.|.  .:|:      ||...
  Fly    12 ELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVN 76

  Fly    51 INLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGT 115
            ::|.||||.|  |:|:.|..:|.::||.|:|||:.:|.|..|.:..||||:|..||..|:||||.
  Fly    77 VSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGC 139

  Fly   116 KLDLR---DDKNTIEKLRDK--------KLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVF 169
            |.|||   .|:|.:....:|        |...:...:..|:|||:| |.|.|.|..|..|:..||
  Fly   140 KNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELG-VAYYETSVFTYFGVNEVF 203

  Fly   170 DEAIRSVL 177
            :.||||.|
  Fly   204 ENAIRSAL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 76/199 (38%)
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 76/200 (38%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.