DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and rhoca

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_957444.1 Gene:rhoca / 394125 ZFINID:ZDB-GENE-040426-1337 Length:193 Species:Danio rerio


Alignment Length:194 Identity:108/194 - (55%)
Similarity:136/194 - (70%) Gaps:3/194 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQED 63
            |.||  |.|:|||||.|||||||.::.:.||..|:||||:||.|::.||:|.:.|.|||||||||
Zfish     1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDSKQVELALWDTAGQED 65

  Fly    64 YDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEK 128
            ||||||||||.|||.|:|||:.:|.|.||:..||.|||:|.||:.||||||.|.|||.|:||..:
Zfish    66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKRDLRTDENTRRE 130

  Fly   129 LRDKKLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQPKSKRKCALL 192
            |...|..|:...:|..||..|.|..||||||.|:.|::.||:.|.|:.| .|.:.|.:..|:||
Zfish   131 LTKMKQEPVKIEEGRDMANRISAFGYLECSAKTKDGVREVFEMATRAAL-QVRKRKKRSGCSLL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 101/174 (58%)
rhocaNP_957444.1 RhoA_like 5..179 CDD:206662 99/173 (57%)

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