DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and rhogb

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_956334.1 Gene:rhogb / 336933 ZFINID:ZDB-GENE-030131-8877 Length:191 Species:Danio rerio


Alignment Length:193 Identity:127/193 - (65%)
Similarity:159/193 - (82%) Gaps:3/193 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65
            ||:||||||||||||||||||||||.|||.|||||||||||:.|.||.:.::|.||||||||:||
Zfish     1 MQSIKCVVVGDGAVGKTCLLISYTTGAFPKEYIPTVFDNYSSQVSVDNRTVSLNLWDTAGQEEYD 65

  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLR 130
            |||.||||||:||:||||:.:|.|:||::.||:|||.|||||.||:|||||.|||:|.:.::||:
Zfish    66 RLRTLSYPQTNVFIICFSISSPPSYENIKHKWHPEVTHHCPSVPILLVGTKSDLRNDADVLKKLK 130

  Fly   131 DKKLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQP-KSKRKCALL 192
            ::..||||..||.|:|::|.||||.|||||:|.|:|.||.:|:|:.|.|  || .:|:.|.||
Zfish   131 EQNQAPITTQQGQALARQIHAVKYRECSALSQDGIKDVFADAVRAYLSP--QPVANKKPCILL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 117/172 (68%)
rhogbNP_956334.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..191 CDD:476819 125/191 (65%)

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