DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and rhoq

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_956112.1 Gene:rhoq / 327510 ZFINID:ZDB-GENE-030131-5721 Length:205 Species:Danio rerio


Alignment Length:195 Identity:123/195 - (63%)
Similarity:148/195 - (75%) Gaps:6/195 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            :||||||||||||||||:||..:|||.||:|||||:|:.:|.|..|...|||:||||||||||||
Zfish    10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLR 74

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKK 133
            |||||.|||||||||:||||||:|||.:|.||::.:.|:.|.:|:||::|||||..||.||.|.|
Zfish    75 PLSYPMTDVFLICFSVVNPASFQNVREEWVPELQEYAPNIPYLLIGTQIDLRDDPKTIAKLNDVK 139

  Fly   134 LAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQPKSKR------KCALL 192
            ..||...||..:||||||..|:||||||||||||||||||.::|.|......:|      .|.|:
Zfish   140 EKPIVTEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILAPKKGALKRRLGPRCINCCLI 204

  Fly   193  192
            Zfish   205  204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 118/171 (69%)
rhoqNP_956112.1 P-loop containing Nucleoside Triphosphate Hydrolases 10..183 CDD:476819 118/172 (69%)

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