DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and Rhobtb1

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001101092.1 Gene:Rhobtb1 / 309722 RGDID:1306871 Length:695 Species:Rattus norvegicus


Alignment Length:230 Identity:83/230 - (36%)
Similarity:117/230 - (50%) Gaps:48/230 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEY------IPTVF--DNY--------SANVMVDAK 49
            ::.||||||||.|||||.|:.:...|....:|      :|||:  |.|        .:..:||..
  Rat    12 VETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEV 76

  Fly    50 PINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVG 114
            .|:|.||||.|  |:.:.|..:|.::||.::|||:.||.|..:|:..||.|::|.||.||::|||
  Rat    77 SISLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKTMWYQEIKHFCPRTPVVLVG 139

  Fly   115 TKLDLR-DDKNTIEKLRDKKLAPITY------PQGLAMAKEIGAVKYLECSALTQKGLKTVFDEA 172
            .:|||| .|...:.:.|.....||..      .:|..:|||:| :.|.|.|...|.|:|.|||.|
  Rat   140 CQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKELG-IPYYETSVFDQFGIKDVFDNA 203

  Fly   173 IRSVL----------------------CPVLQPKS 185
            ||:.|                      .|.|.||:
  Rat   204 IRAALISRRHLQFWKSHLKKVQKPLLQAPFLPPKA 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 78/195 (40%)
Rhobtb1NP_001101092.1 RhoBTB 13..207 CDD:133275 78/196 (40%)
BTB_POZ 248..459 CDD:453885
BTB_POZ 464..589 CDD:453885
BACK_RHOBTB1 592..691 CDD:350605
Blue background indicates that the domain is not in the aligned region.

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