DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and Rhod

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001099793.1 Gene:Rhod / 293660 RGDID:1310985 Length:210 Species:Rattus norvegicus


Alignment Length:174 Identity:92/174 - (52%)
Similarity:118/174 - (67%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            ||.|:||||..|||.|::.:...|||..|.||||:.|:|.:.:..||:.|.:||||||:||||||
  Rat    18 IKVVLVGDGGCGKTSLMMVFANGAFPESYNPTVFERYNATLQMKGKPVRLQIWDTAGQDDYDRLR 82

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKK 133
            ||.||..:|.|:||.:.||.||:||..:|||||.|.|...|||:||.|:|||.||..:..||.|:
  Rat    83 PLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNTLRKKR 147

  Fly   134 LAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVL 177
            |.|:||.:|..||:.:|||.||||||.....::.||.||....|
  Rat   148 LEPVTYHRGHDMARSVGAVAYLECSARLHDNVEAVFQEAAEVAL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 91/171 (53%)
RhodNP_001099793.1 Rho4_like 16..210 CDD:206704 92/174 (53%)

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