DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rac1 and rho2

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_594569.1 Gene:rho2 / 2542773 PomBaseID:SPAC16.01 Length:200 Species:Schizosaccharomyces pombe


Alignment Length:190 Identity:90/190 - (47%)
Similarity:120/190 - (63%) Gaps:2/190 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRP 69
            |.|||||||.|||.||..:|...||.||:||||:||.::..||.|.:.|.||||||||:|:||||
pombe    10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRP 74

  Fly    70 LSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKKL 134
            :||.:..:.|:.|::.:|.|.|||..||..|:...||:.|.||||.|.|||.|...||::|.:..
pombe    75 MSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPVAIEEMRRRNQ 139

  Fly   135 APITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLC--PVLQPKSKRKCALL 192
            ..:...|...:|:.|||.||:|||:||..|:..||:.|.|:.|.  .....||..||.::
pombe   140 NFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAALTVRDSENDKSSTKCCII 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 85/170 (50%)
rho2NP_594569.1 Rho2 8..199 CDD:206702 90/188 (48%)

Return to query results.
Submit another query.