DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and RHOQ

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_036381.2 Gene:RHOQ / 23433 HGNCID:17736 Length:205 Species:Homo sapiens


Alignment Length:195 Identity:121/195 - (62%)
Similarity:148/195 - (75%) Gaps:6/195 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            :||||||||||||||||:||..:|||.||:|||||:|:.:|.|..|...|||:||||||||||||
Human    10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLR 74

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKK 133
            |||||.|||||||||:||||||:||:.:|.||::.:.|:.|.:|:||::|||||..|:.:|.|.|
Human    75 PLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139

  Fly   134 LAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQPKSKR------KCALL 192
            ..||...||..:||||||..|:||||||||||||||||||.::|.|......||      .|.|:
Human   140 EKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKHTVKKRIGSRCINCCLI 204

  Fly   193  192
            Human   205  204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 115/171 (67%)
RHOQNP_036381.2 Tc10 10..183 CDD:206707 115/172 (67%)
Effector region. /evidence=ECO:0000250 38..46 6/7 (86%)

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