DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and chw-1

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_505686.1 Gene:chw-1 / 184848 WormBaseID:WBGene00009059 Length:207 Species:Caenorhabditis elegans


Alignment Length:174 Identity:87/174 - (50%)
Similarity:113/174 - (64%) Gaps:14/174 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDR 66
            :.:||:.||:.|||||.:::|||||.:|..|:||.|||:|..|:||.|||.|.|.|||||..:|.
 Worm     8 KCLKCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNFSVVVLVDKKPIRLQLHDTAGQSSFDT 72

  Fly    67 LRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDD--KNTIEKL 129
            ||||.|...|||:|.:|:|:..|||:|...|||||....|.|.:|||||:.|.|..  .||:.:|
 Worm    73 LRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEVTKRNPGTKLILVGTQADQRWQVRGNTVTQL 137

  Fly   130 RDKKLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAI 173
            |           |.|:|..:|| ::.|||||||..||.:||.||
 Worm   138 R-----------GKALADRLGA-EFFECSALTQHNLKQMFDAAI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 87/173 (50%)
chw-1NP_505686.1 Wrch_1 10..172 CDD:133330 87/172 (51%)

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